Gene Spro_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1989 
SymbolhemA 
ID5603230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2177050 
End bp2178312 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content59% 
IMG OID640937527 
Productglutamyl-tRNA reductase 
Protein accessionYP_001478220 
Protein GI157370231 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00499789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00167683 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCTGC TGGCGTTAGG TATAAATCAC AAAACCGCTC CGGTTTCTCT GCGTGAAAGG 
GTGACCTTCT CCCCAGAGTC TATCGAACAG GCGCTAACCA GCTTGCTCCA ACAACCGTTG
GTGCAGGGCG GTGTCGTGTT GTCTACCTGC AACCGCACCG AGCTGTATCT TAGCGTGGAG
CAACAGGAAC ATATTCACGA ACAGCTGGTC TCCTGGCTGT GTGAGTACCA CCACCTGCGC
CCGGAAGAGG TGAGTAAAAG CCTGTACTGG CACCACGGCA ACGAAGCCGT TAGCCACCTG
ATGCGCGTGG CCAGCGGGTT GGATTCACTG GTGCTGGGCG AACCGCAAAT TCTTGGGCAG
GTGAAGAAAG CCTTTGCCGA GTCCCAACGC GGGCAGTCAC TGTCTGGTGA GCTTGAGCGC
CTGTTCCAAA AATCCTTCTC CGTCGCCAAA CGCGTACGTA CCGAAACCGA AATCGGCGCC
AGTGCGGTAT CCGTGGCCTT TGCCGCCTGT ACCCTGGCAC GCCAGATATT CGAATCTCTT
GCCGAACTGA ACGTCCTGTT GGTGGGGGCC GGTGAAACCA TTGAACTGGT GGCGCGTCAT
CTGCGCGAGC ATAAAGTACG GCATATGATT ATTGCCAACC GTACCCGCGA GCGCGCCCAG
CTGCTGGCGG ACGAAGTCGG CGCAGAAGTG ATCACCTTGC CGGAAATCGA CGAACGCCTG
GCGGACGCCG ACATTATTAT CAGTTCTACC GCCAGCCCAC TGCCGATCAT CGGTAAAGGG
ATGGTGGAGC GAGCGCTGAA AGCGCGCCGC AACCAGCCAA TGCTGCTGGT GGATATTGCC
GTACCGCGCG ATATCGAACC GGAAGTGGGC AAGCTGGCTA ACGCCTATTT ATATAGCGTG
GACGATCTGC ACGCCATCAT TCAGAGCAAC CTGGCGCAGC GCAAGGCCGC GGCGGTGCAG
GCTGAGTCTA TCGTCCAGCA GGAAAGCATC AACTTTATGG CCTGGTTGCG CTCGCAGGGC
GCAGTGGAAA CCATCCGCGA CTACCGTTCG CAGGCCGATC AGATCCGTGC GGAAATGGAA
GCCAAAGCCC TGGCCGCCAT TGCGCAGGGC GCGGACGTGG AGCAGGTTAT CCACGAGCTG
GCCCACCGGC TGACCAACCG TCTTATTCAT GCCCCTACCA AATCCCTCCA ACAGGCCGCC
GGCGATGGCG ACGTGGAGCG GTTGCAATTA TTACGCGACA GCCTCGGGCT GGATCAGCAT
TAG
 
Protein sequence
MTLLALGINH KTAPVSLRER VTFSPESIEQ ALTSLLQQPL VQGGVVLSTC NRTELYLSVE 
QQEHIHEQLV SWLCEYHHLR PEEVSKSLYW HHGNEAVSHL MRVASGLDSL VLGEPQILGQ
VKKAFAESQR GQSLSGELER LFQKSFSVAK RVRTETEIGA SAVSVAFAAC TLARQIFESL
AELNVLLVGA GETIELVARH LREHKVRHMI IANRTRERAQ LLADEVGAEV ITLPEIDERL
ADADIIISST ASPLPIIGKG MVERALKARR NQPMLLVDIA VPRDIEPEVG KLANAYLYSV
DDLHAIIQSN LAQRKAAAVQ AESIVQQESI NFMAWLRSQG AVETIRDYRS QADQIRAEME
AKALAAIAQG ADVEQVIHEL AHRLTNRLIH APTKSLQQAA GDGDVERLQL LRDSLGLDQH