| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1986 |
|---|
| Symbol | |
|---|
| ID | 5603256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2173728 |
|---|
| End bp | 2174675 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640937524 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_001478217 |
|---|
| Protein GI | 157370228 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.675824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0111954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGATA TGAAGCTTTT TGCTGGTAAC GCCACCCCGG AACTAGCACA ACGTATTGCC
AACCGTTTGT ACACCAGCCT TGGTGACGCC GCAGTAGGTC GTTTTAGCGA CGGCGAAGTG
AGCGTGCAAA TCAACGAAAA TGTACGCGGC GGTGATATTT TCATCATCCA GTCCACCTGT
GCCCCTACCA ACGATAACCT GATGGAACTG GTTGTTATGG TAGATGCTCT GCGTCGCGCC
TCCGCAGGTC GTATTACTGC TGTTATCCCT TATTTCGGCT ATGCCCGCCA GGATCGCCGC
GTGCGTTCTG CTCGTGTGCC AATCACCGCC AAAGTTGTCG CCGACTTCCT CTCCAGCGTT
GGGGTTGACC GCGTACTGAC GGTGGATCTG CACGCTGAAC AGATCCAGGG CTTCTTCGAT
GTTCCTGTAG ATAACGTGTT CGGTAGCCCG ATCCTGCTCG AAGACATGCT GCAACAGAAT
CTGGAGAACC CAATCGTGGT TTCCCCGGAC ATCGGTGGCG TAGTGCGCGC CCGCGCTATC
GCCAAACTGC TGAACGATAC CGATATGGCT ATCATCGATA AACGCCGCCC ACGTGCGAAC
GTTTCCCAGG TGATGCACAT CATTGGTGAC GTGGCAGGCC GTGACTGCGT GCTGGTTGAC
GACATGATCG ACACCGGCGG TACCTTGTGT AAAGCAGCTG AAGCGTTGAA AGAACGCGGT
GCCAAGCGCG TATTTGCCTA CGCGACCCAC CCGATCTTCT CCGGTAATGC TGTGGAAAAC
ATCCGCAACT CGGTGATTGA TGAAGTGATC GTCTGCGATA CCATTCCGCT GTCTGCAGAA
ATCAAGGCAC TGAAAAACGT GCGTACTCTG ACGCTGTCCG GCATGCTGGC TGAAGCCATC
CGTCGTATCA GCAATGAAGA GTCAATTTCT GCGATGTTCG AGCATTAA
|
|---|
| Protein sequence | MPDMKLFAGN ATPELAQRIA NRLYTSLGDA AVGRFSDGEV SVQINENVRG GDIFIIQSTC
APTNDNLMEL VVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTVDL HAEQIQGFFD VPVDNVFGSP ILLEDMLQQN LENPIVVSPD IGGVVRARAI
AKLLNDTDMA IIDKRRPRAN VSQVMHIIGD VAGRDCVLVD DMIDTGGTLC KAAEALKERG
AKRVFAYATH PIFSGNAVEN IRNSVIDEVI VCDTIPLSAE IKALKNVRTL TLSGMLAEAI
RRISNEESIS AMFEH
|
|---|
| |