Gene Spro_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1979 
Symbol 
ID5603370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2165117 
End bp2166508 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content50% 
IMG OID640937517 
Producthypothetical protein 
Protein accessionYP_001478210 
Protein GI157370221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00202926 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGAGA TTAAATTAAG CGACCAACTA GGTGCCATGG CCATTATTGA CTCACTCTAC 
GCACAGCGAA TTGCACTGGA CGAACATTTG GATCTGCCCA AATTACGCCA GAAAATTACA
CAACGCATCC GTGATTACTA TCAGTCCAGC GGAACCGACA TCGACGATAA ACTGATTGAG
CAGGGAGTTA AAAATTGGTT TTCACAGCGC CTGCGCTATC AGACAAACAA AATGAGCCTG
AGCCAACGCG CTGCTGCATT CCTATACATG ACCAGTAAGC AGTGGTTGAC GGGACTTGCT
ATCATACTTG TTGCACTGGC CCTTGCCTGG AAACTGAGTC TGTACATAGG CCAGCACCAA
CTTGCCGCGC TGGAAAAGAA CATCGCGACC CAGACCAGCC AAAGCGACCA AATGGCGGCG
CAAGCGCAGA CGTTATCTGA CCAACTCAGC AAAATGAAGC ATGAGCCGTT CATCTATGCA
AAAGTACCAG CCGACCAGAT AATCACGCAG GCGGAAAACC TTTTGTCCAA TTTCCAGTCC
CGCCAAGCCG CACCGCTTGT CTCCGCGGAA AATACACCAC AAAGGTTGGA CATCCTTACT
GCGGTGAATC AGCAAAACCA GGCGTTACTC ACGCAAGTGA GGACGCTAAT GCTCCGCTGG
CCACTACTGC AAAAATGGGA TAGCACCCTC GGCAATATGG ATAAAGATCC ACAGCTGCAA
ACCTATCTCA AGTGGGCGCC CGACCTGACA GGGAAATTGG CCGAAGCCAC CTCAGCGCTG
TCGAATAACG CCGCAGATAC GCAGATCAAG ATCGAGGCAG CCTTCAAGGC TTATGACCGT
GAACGTATGC GTGATGGCTT ATATTTCACG ATGGACCAAA GAACCCAAAA ACTGCGTAAT
CTCAAGCTTT CCCGCCAGGA CCGAGTAAAA GTCGATAACG ATATTAGCTA TGCGCGCAAT
CTCATCGCTC GTGCAGACCT AAATGACCGG GTTATCCCCC CTCTTTGGCT AGAGGCCTTG
ACAGGGCTGG ACTACACCTA TGATCTGATC ATGCAACCGC TGACGCTGAT TATTGTCGAT
CGGGTGGGCG AGAAGTCGGG AGTAGAACGC ACCTACGATA ATTCAGGCGG TAAAAGCTGG
TATTTGATCG TGGAAACACA AACGCCAAGC CATACACCTT TCCCAATATC AGTAAAAGAC
AGTGAAACCG GTAGGAAAAC GCGAACAAGT CAATTCGGTA TCCGAGTTTC GCAAAAAGAG
TATAAGAAGT TGAAAAAAGA CAAGCTGGAT GACGGTCATA TAGATCATGC TCTCGTCGGT
AAGAAACCTG CCGGCCAACT GGGCTTTACC TACACTCGCC CAGTTCAGGA CGGCGTAATT
ACCGAGTGGT AA
 
Protein sequence
MSEIKLSDQL GAMAIIDSLY AQRIALDEHL DLPKLRQKIT QRIRDYYQSS GTDIDDKLIE 
QGVKNWFSQR LRYQTNKMSL SQRAAAFLYM TSKQWLTGLA IILVALALAW KLSLYIGQHQ
LAALEKNIAT QTSQSDQMAA QAQTLSDQLS KMKHEPFIYA KVPADQIITQ AENLLSNFQS
RQAAPLVSAE NTPQRLDILT AVNQQNQALL TQVRTLMLRW PLLQKWDSTL GNMDKDPQLQ
TYLKWAPDLT GKLAEATSAL SNNAADTQIK IEAAFKAYDR ERMRDGLYFT MDQRTQKLRN
LKLSRQDRVK VDNDISYARN LIARADLNDR VIPPLWLEAL TGLDYTYDLI MQPLTLIIVD
RVGEKSGVER TYDNSGGKSW YLIVETQTPS HTPFPISVKD SETGRKTRTS QFGIRVSQKE
YKKLKKDKLD DGHIDHALVG KKPAGQLGFT YTRPVQDGVI TEW