Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1969 |
Symbol | |
ID | 5603420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2153020 |
End bp | 2153445 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640937507 |
Product | UspA domain-containing protein |
Protein accession | YP_001478200 |
Protein GI | 157370211 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0857578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00755954 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGTTATC AACATATTGT TATCGCCACC GACCTGAGTG ATGACGGCAA ACGGCTGGTG GAAAAAGGCG CGCGCTTGGC CGCTGCGCTG CAGGCTAAAC TTTCCCTTAT TTACGTGGAT ATTTACTACG ATACCTATCA TGCCGCGATT GGTTTCTCTG AGAAGAGTTA CGACGGTGGA TCTTTTGAAG ACAAGATCAA AAAAGAGCTG GAGCCGTTGA CCCAAAACGT GAATTACCCG ATCTACGAGG TGATTATTGG GCGCGGTGAT TTCACCGAGC AATTGCAAAA TGCGGTGGTG GATAAAAGCA TCGATCTGGT GATCTTCGGC CATCACCACG ATCTGTGGAA CAAGCTGTTT TCCTCTACTC AGCATGCGAT CAACCAGTTG AACGTTGACG TACTGGTGAT CCCGATTAAA TCCTAG
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Protein sequence | MCYQHIVIAT DLSDDGKRLV EKGARLAAAL QAKLSLIYVD IYYDTYHAAI GFSEKSYDGG SFEDKIKKEL EPLTQNVNYP IYEVIIGRGD FTEQLQNAVV DKSIDLVIFG HHHDLWNKLF SSTQHAINQL NVDVLVIPIK S
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