Gene Spro_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1968 
Symbol 
ID5603419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2151457 
End bp2152848 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content54% 
IMG OID640937506 
Productcytochrome-c peroxidase 
Protein accessionYP_001478199 
Protein GI157370210 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0786511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0102191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TCACCCGTAT TGCGGCGATT TCCATTGCAG CTGTTGCGTT GGTTTATTTC 
GGTTTGGCCG GCTATGTCTG GCATCTCGAT ACCCAGCGAA TGGAGAATAG CTCGGTACTG
CGTTCCGCAG TGCAACAGAA TAACCAGGTG CTGGGGTTGC TGAGGGAAAA GGGCTGCGAC
TACTGCCATA CCCCGTCCGC TTCGCTTCCG TTCTATGCCT CTTTCCCCAT CGCCAAACAG
TTGATGGAAT ACGATATTCG CCTGGGTTAC TCCTCCTTCA ACCTGGAGCC TGTGCGCAGC
GCCTTGATTA AAGATAGGCC GCAGGCACAA AGCGACCTGA ATAAAATTGA GTGGGTAATG
CAGCACAAAA CCATGCCACC CGCCCGCTAT GTGGCTTTGC ACTGGGCTGG GCAGATCAAT
CCCGATGAAC GGGAAATTAT TCTCGCCTGG ATAGCGCAGC AACGCGCGCG CTATTACGCC
AGTGCAGATA CTGCACAGCC CCATCGTAAT GAGCCGGTTC AACCGATCCC CAAAACATTG
CCGGTTGATG GGCAGAAGGT GGCATTGGGG TTTCGGCTTT TTCACGATCC CCGCCTGTCT
GGGGATAACA CTCTTTCCTG TGCTCACTGT CACTCGTTGA ATACCGGCGG GGTCGACGGA
AGAAAAACCT CAGTCGGGGT AGGCGGTGCG GTGGGGCCGA TTAACGCGCC AACGGTGTTT
AACTCGGTGT TCAATAGCGA ACAATTCTGG GATGGCCGTG CGCCGTCGCT ACAGGCACAG
GCCGGTGGGC CGCCATTAAA CCCGATAGAA ATGGCCTCTA AATCCTGGGA TGAAATTATC
AATAAGCTCG ATAAGGATCC GCTGCTGACC CGCGATTTTG CTGCGGTCTA TCCACAAGGG
CTCAGCGGCG AAAATATTAC CGATGCCATC GCCGAATTTG AAAAAACCTT AATCACCCCG
AATGCCCCCT TCGATAACTG GCTGCGCGGC GATGAGAATG CCATGACGAT GCAGCAAAAA
CGCGGCTATC AATTATTTAA AGACAACAAA TGCGCCACCT GCCATGCAGG GATCATATTA
GGCGGCCGCT CTTTTGAGCC TTTGGGGCTG AAGCGTGATT TTAATTTTGG CGAGATCACC
ACGGTAGATA TTGGGCGTAT GAACGTCACC AGTGCTGTGC GTGACCGGTT ACGTCAGAAG
GTGCCTGGCT TGCGCAATGT CGCTCAGACC GCGCCTTATT TTCATCGTGG CGACGTCGCT
ACGCTGGATC AGGCGGTAAA ACTGATGTTG CGTTATCAGG TGGGTAGCGA ACTGCCTCAG
CAGGACGTCG ATGATATTGT CGCCTTCCTC GAAAGTCTGA GCGGGGTCTA TACCCCTTAC
CGGCCAGAAT AA
 
Protein sequence
MKKVTRIAAI SIAAVALVYF GLAGYVWHLD TQRMENSSVL RSAVQQNNQV LGLLREKGCD 
YCHTPSASLP FYASFPIAKQ LMEYDIRLGY SSFNLEPVRS ALIKDRPQAQ SDLNKIEWVM
QHKTMPPARY VALHWAGQIN PDEREIILAW IAQQRARYYA SADTAQPHRN EPVQPIPKTL
PVDGQKVALG FRLFHDPRLS GDNTLSCAHC HSLNTGGVDG RKTSVGVGGA VGPINAPTVF
NSVFNSEQFW DGRAPSLQAQ AGGPPLNPIE MASKSWDEII NKLDKDPLLT RDFAAVYPQG
LSGENITDAI AEFEKTLITP NAPFDNWLRG DENAMTMQQK RGYQLFKDNK CATCHAGIIL
GGRSFEPLGL KRDFNFGEIT TVDIGRMNVT SAVRDRLRQK VPGLRNVAQT APYFHRGDVA
TLDQAVKLML RYQVGSELPQ QDVDDIVAFL ESLSGVYTPY RPE