Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1966 |
Symbol | |
ID | 5603455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2149503 |
End bp | 2150318 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640937504 |
Product | YaeC family lipoprotein |
Protein accession | YP_001478197 |
Protein GI | 157370208 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00914469 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACATTTA CACTAAAAAA ACTTGCCGCC ACGCTGGCAG TAACCGGTAC CCTGCTGCTG ACCGCCTGCG GGCCGACCGC GCAAGACGCT CACCACATCA AGGTTGGCAT CAGCTCCGGC ATCGATCAGG CGATGTGGGC AGTGGTGCAA AAGGTTGCCA AACAGAAGTA CGATCTGGAT GTGGAAGTGG TGACGTTCAC GGATTACGTG TTGCCCAATG AGGCGCTGAA TAACGGCGAT CTGGATATCA ATGCCTTCCA GCACAAACCT TATCTGGAAA AACAGATCCA GGAACGCGGT TACAAGTTGG TGGCGGTGGG CAACACCTTT GTTTACCCGA TTGCCGGTTA CTCGAAAAAG ATCTCTTCCC TCAGTCAACT GCCCGATGGC GCACAGGTCG CGGTGCCGAA TGACCCAACC AACCTGGGTC GTTCACTGCT GCTGTTGCAA AAACAGGGGC TGATCGGGCT GAAGGATGGG GTCGGGCTGC TGCCTACTTC ACTGGATATC GTCAGCAACC CAAAGAAATT GAAAATCGTT GAGATCGAAG CGCCACAGTT GCCGCGCGCG CTGGATGACA AACAAATCGC ACTGGCGATT ATCAACACCA ACTACTCCAG CCAAATTGGG CTGACACCGG GCAAAGACGG GCTGTTTGTC GAGGATAAAA ACTCGCCGTA CGTCAATATT TTCGCCAGTC GGGTAGATAA CCAGAACAAT GAAAACGTAA AAAACCTGGT CAAGGCCTAC CAGACCGATG AGGTCGCCGC CAGCGCCGCC GAAATCTACA AGGGCGACGC GGTTAAAGGC TGGTAA
|
Protein sequence | MTFTLKKLAA TLAVTGTLLL TACGPTAQDA HHIKVGISSG IDQAMWAVVQ KVAKQKYDLD VEVVTFTDYV LPNEALNNGD LDINAFQHKP YLEKQIQERG YKLVAVGNTF VYPIAGYSKK ISSLSQLPDG AQVAVPNDPT NLGRSLLLLQ KQGLIGLKDG VGLLPTSLDI VSNPKKLKIV EIEAPQLPRA LDDKQIALAI INTNYSSQIG LTPGKDGLFV EDKNSPYVNI FASRVDNQNN ENVKNLVKAY QTDEVAASAA EIYKGDAVKG W
|
| |