Gene Spro_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1962 
Symbol 
ID5607307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2143683 
End bp2145167 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content54% 
IMG OID640937500 
ProductABC transporter-related protein 
Protein accessionYP_001478193 
Protein GI157370204 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0299142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCTT ATGTTCTTGA GGCTGAAGGC ATCAGTAAGC AGTTTCCCGG CGTGAAGGCG 
CTGGATAAAG TCTCAATTAA AATCAAACCA GGCAGCGTAC ACGCATTAAT GGGGGAAAAC
GGCGCGGGTA AATCCACGCT GATGAAATGT TTAATCGGTA TTTATCACCC CGATGAAGGC
ACCATAAAAA TAAAAGGCCA ACCGGTGACC TTCAGCGACA CGCTGCAGGC GCTGCATTCG
GGGATTTCCA TGATTCACCA GGAACTCAAC CTGGTGCCTT ATATGACGGT GGCGGAAAAC
ATTTGGCTGG GGCGTGAGCC GGCAAAGCTG GGCTTTGTGA ATCATGATCA ACTGAACAAG
AAAACCCGTG AGCTGCTGGC GCGGCTGAAC ATCAAGCTCA AGCCGGAGAC GTTGGTCGGT
GAACTGAGCA TCGCTAATCA GCAAATGGTG GAGATCGCCA AGGCGGTTTC CTACAACGCG
GACGTGCTGA TCATGGACGA ACCCACCTCG GCGCTGACCG AAGGCGAGGT GGTGCATCTG
TTCGCCATCA TTCGCGAACT GCGTGACCAG GGCAAAGGCA TTATTTATAT CAGCCACAAG
ATGGACGAGA TTTTCGCCAT TACCGATGAG GTGAGCATCT TCCGTGACGG CACCTTTATC
GCCTGCGATA AAACCGAAAA CCTAACCAAA CAGTCGCTGA TCACCATGAT GGTGGGGCGT
GAACTGACCC AGATGTTCCC CAAATTCAAC AACAATATCG GCGAAGAAGT GCTGCGTGTC
GAAGGGTTGC GACGTGCCGA CTGGTTCCAC GATATCTCGT TCAGCGTCAA GCGCGGCGAG
ATCCTCGGCG TCGCCGGGCT GGTGGGGGCC GGTCGCAGCG AGGTGATGGA AAGCCTGTTC
GGCATGTACC CGGCGGACGG CGGCAGCATT TTCATTGAGG GCAAGGCGGC GAAGGTCGAT
TCACCCTCGC GAGCGATTGA ACTCGGGTTG GCGTTTCTCA CCGAAGACCG CAAGAAGTCC
GGGCTGTTCC TGGTGTTGTC GGTGGTCGAG AACATGAGCA TCGTCAACCT GTCGGAGTAC
ATCGGCAAGA ACGGCTTTGT CAGTCATGTG CAAATGGCCA AGGACTGCAT GGAGCAGATC
AAAAAGCTCA ACATCAAAAC CCCGACCATG GATCAAATCA TCAATAACCT GAGCGGTGGC
AATCAGCAGA AGGTGCTGAT TGCCCGTTGG CTGCTGGCCC AACCGAAAAT ATTGATCCTC
GATGAGCCAA CTCGCGGCAT CGACGTGGGC GCGAAGGCGG AAATCTATCG TCTGATCAGC
GAACTGGCGA ACCGTGGCGT CGCCATTATT TTGGTGTCAT CGGAATTACC GGAGATCCTC
GGCATGAGCG ACCGGGTGAT GGTGATGCAC GGCGGCCGTA TTACCGGCAT TTTGGATAAA
GAAGAAGCGG ATCAGGAAAA AATCCTGGCG CTGGCCTCTG AATAA
 
Protein sequence
MYPYVLEAEG ISKQFPGVKA LDKVSIKIKP GSVHALMGEN GAGKSTLMKC LIGIYHPDEG 
TIKIKGQPVT FSDTLQALHS GISMIHQELN LVPYMTVAEN IWLGREPAKL GFVNHDQLNK
KTRELLARLN IKLKPETLVG ELSIANQQMV EIAKAVSYNA DVLIMDEPTS ALTEGEVVHL
FAIIRELRDQ GKGIIYISHK MDEIFAITDE VSIFRDGTFI ACDKTENLTK QSLITMMVGR
ELTQMFPKFN NNIGEEVLRV EGLRRADWFH DISFSVKRGE ILGVAGLVGA GRSEVMESLF
GMYPADGGSI FIEGKAAKVD SPSRAIELGL AFLTEDRKKS GLFLVLSVVE NMSIVNLSEY
IGKNGFVSHV QMAKDCMEQI KKLNIKTPTM DQIINNLSGG NQQKVLIARW LLAQPKILIL
DEPTRGIDVG AKAEIYRLIS ELANRGVAII LVSSELPEIL GMSDRVMVMH GGRITGILDK
EEADQEKILA LASE