Gene Spro_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1960 
Symbol 
ID5607075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2141300 
End bp2142142 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID640937498 
Productdeoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001478191 
Protein GI157370202 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0102816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA GCAGTAAGGT ACGGATGAAC CGGCTGTTTA ATAACGGCAA ATGCCTCGAC 
GTGGCGATTG ATCACGGCAT CGCCAATGAG CCGGATTTTT TAATCGGTCT GGAAGACATT
GAACGGGTGA TGGACAGCCT GATCGTTGCC CGCCCCGATG CCATTCAGGT CAACTACGGT
CAGGCGGATT TACTGCAACG CTCGGCACAA CGCGATAAGC CGGCGCTGGT GATGCGCACC
GACGTCGGCA ATGCTTATAA CGCCGCACGT CACCGTGAAA TGTGGGCAGT GCTGCATAAT
CCAGAAGCGC CCATCCTCGC CGCACTGCAG ATGGATGCGG CGGCGGTGGT GGTTAATCTG
TATCTGATCC CCGATGAACC GGGCATTTTC CGCCAGTGCG TGGAGAATAT TGGTCGTCTG
CGTCATGCCT GCGACCGCTA CGCCATGCCG CTGATGATCG AACCACTGGT GATGGCGCCG
GCCGGCCAGG GCGCGGCCTA CGGTTCGCTC GGTGACGTAG AAAAAATGGT GCCGTTAGTC
CGGCTGGCGC GTGAACTGGG TGCCGACATC ATCAAGGCCG ACCCGACGGA GCGAGTAGAG
GACTTCCACC GCATTGTGGA AGCGGCGCGC TGCCCAACGC TGGTGCGTGG CGGCGGTAAA
GGCGAACTGG GCGCGGTACT GGAAAAATCC GCCGCCCTGA TGGCGCAAGG GGCATCCGGT
ATGGTGTACG GCCGCAATGT CTATCAACAC AGCAACCCAT CAAAAGTGGT CAGTGCATTA
ATGGCTATCA TTCATCAGGG TGCCAGCGGC CAGCAAGGAC TGGAAATCTA CCATCAGCCC
TGA
 
Protein sequence
MQLSSKVRMN RLFNNGKCLD VAIDHGIANE PDFLIGLEDI ERVMDSLIVA RPDAIQVNYG 
QADLLQRSAQ RDKPALVMRT DVGNAYNAAR HREMWAVLHN PEAPILAALQ MDAAAVVVNL
YLIPDEPGIF RQCVENIGRL RHACDRYAMP LMIEPLVMAP AGQGAAYGSL GDVEKMVPLV
RLARELGADI IKADPTERVE DFHRIVEAAR CPTLVRGGGK GELGAVLEKS AALMAQGASG
MVYGRNVYQH SNPSKVVSAL MAIIHQGASG QQGLEIYHQP