| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1932 |
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| Symbol | |
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| ID | 5605559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 2116416 |
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| End bp | 2118026 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640937470 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001478163 |
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| Protein GI | 157370174 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000463259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00239553 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAGGT GCTGGCGCGG GGTTTTGGCA AGGATTATCA CACCGCCGCG CAGGTTGCCG
GGCAACGACC CGGCGATAAG CAGACAGGGA TTGATCTATC AAATAATAAT GCAGCAGAGG
TTCACTTTGA CTTCGTCAGA TTCCACACCG ACGGCGCCAC AACGCCATGC CATCCCCCCG
GGAGCCGGGG CACTGTTCTT TATCCAAATC TTCGCCACGC TGGGTTTTGC CGTGCTGTAC
TCCACGTTGG TACTGTACGC CACCAAGCGT TTGGGCTTCA GCGAAACGAA CGCTAATGCC
ATGATGGGCG TATTCGGGGC GTTCAACTAC GGCTTGCATA TGTTCGGCGG CTATCTGGGT
GGGCGCTTCC TCAGTAACCG CAACCTGTTC GTACTGGGTA TGGTGCTGCA GGTGATTGGC
TGCGCGTTGA TCGCCGTGGC GGGTGTCTGG GGACTTTACT GGGGCCTGGC GATGTTCCTG
ACCGGCAGTG GGCTGAACGT CACCTGCATT AATATGATGT TGACCCAGCG TTTTAAGCCG
GACGACGATC GGCGTGAATC AGCCTTCTTG TGGAACTATG CCGGGATGAA CCTGGGGTTC
TTTGTCGGTT TTACCGTCGC CGGCTATTTC CAACTGACCG AAAACTACCG CGCGCTGTTC
CTGTTCGCCA CGCTGGGCAA TGCGGCGGCA ATCATCGTCG CCGTCAGCCG TTGGCGCATT
CTGGCCGATC TCAACACACC ATTGCATGAC GCCAGCCGTG GAGAATATCG CTGGCGCATG
CTGGTCGGGT TAGCGGTATT GGTGGTGTTG GTGCCTATTA TCCGCGTGAT GCTGACCCAC
GCCGAGTTCA GCGGTCACTT CGTCATTGGC CTCGGCGTGC TGATTTTCCT GATGCTGTGC
GTGGTCACGT TACGTCATCA TCCGCGTGAC GAGCGTCGCC GGATGACCGC TTATCTGATC
CTGGCATTGG GGTCACTGGT GTTTTGGTCG CTGTATCAGT TGGCGCCAAT GGGGCTGATG
CTGTTCTCCG AGCACAACAT CAATTTGAAT GTCTACGGCA TTCAGGTGGC ACCGCAATGG
ATCCAGAACA TCAATACGTT GGTGATCGTG GTCGGTGGGC CGCTGATGGC CTGGTGGTTC
AATCGCCTGC GCGCCCGTGG CTGCAAAATC GACATTCCCA TGCAGTTTTC CGGTTCGTTG
TTTTTTATCG GGTTGGGTAT GCTGGTCTTG CCGTTGGGTA TCAGCCTGGC CGGCGGTGAC
GGGCTGGTGG CGTTTAAATG GATTGCCATC AGTTATGTGC TGCAGAGCAT CGGTGAACTG
ATGATTTCCC CGATCGGCTA CGCGATGATC GGCAAACTGG CCCCCCCGCG CTATCAGGGG
GTGATGATGG GCTGCTGGAT GATGGTCACC GGCGTCGCTT CGGTATTGGC GGGCTACGTC
TCGGGCCTGA TGCCGGAAAA CAGCGGAAGT ACCCCGGTGT TGACCAACCC CGGTTACAGC
GAAGTGTTTA GCGTGCTGGG CTGGGGAGCC GCAGGTGTCG GCGTGGTGAT GCTGATTTTG
ATCCCGCTGC TGCGCCGCCT AATCAGGCAT GACACCCCGG TCGCAGCCTG A
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| Protein sequence | MERCWRGVLA RIITPPRRLP GNDPAISRQG LIYQIIMQQR FTLTSSDSTP TAPQRHAIPP
GAGALFFIQI FATLGFAVLY STLVLYATKR LGFSETNANA MMGVFGAFNY GLHMFGGYLG
GRFLSNRNLF VLGMVLQVIG CALIAVAGVW GLYWGLAMFL TGSGLNVTCI NMMLTQRFKP
DDDRRESAFL WNYAGMNLGF FVGFTVAGYF QLTENYRALF LFATLGNAAA IIVAVSRWRI
LADLNTPLHD ASRGEYRWRM LVGLAVLVVL VPIIRVMLTH AEFSGHFVIG LGVLIFLMLC
VVTLRHHPRD ERRRMTAYLI LALGSLVFWS LYQLAPMGLM LFSEHNINLN VYGIQVAPQW
IQNINTLVIV VGGPLMAWWF NRLRARGCKI DIPMQFSGSL FFIGLGMLVL PLGISLAGGD
GLVAFKWIAI SYVLQSIGEL MISPIGYAMI GKLAPPRYQG VMMGCWMMVT GVASVLAGYV
SGLMPENSGS TPVLTNPGYS EVFSVLGWGA AGVGVVMLIL IPLLRRLIRH DTPVAA
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