Gene Spro_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1920 
Symbol 
ID5606629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2103202 
End bp2103552 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content56% 
IMG OID640937456 
Producthistidine triad (HIT) protein 
Protein accessionYP_001478151 
Protein GI157370162 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000438261 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGAAG AAACGATTTT CAGTAAAATT ATCCGCCGCG AAATCCCTGC TGATGTGGTC 
TACCAGGACG AATTGGTCAC CGCTTTCCGT GATATTTCAC CTCAGGCCCC GACCCATATT
CTGATCGTAC CCAATGTGCT GATCCCCACC ATCAACGACG TTACTGTTGA GCACGAGGCC
GCTCTGGGCC GCATGATCAC CGCCGCCGCC AGGATTGCCG AGCAGGAAGG CGTCGCCGAA
GACGGCTACC GTCTGATTAT CAATTGCAAT CGCCATGGCG GCCAGGAGGT CTATCATATT
CATATGCATT TGGTCGGTGG CCGCTCCCTG GGGCCGCTGC TGTCACGCTA A
 
Protein sequence
MAEETIFSKI IRREIPADVV YQDELVTAFR DISPQAPTHI LIVPNVLIPT INDVTVEHEA 
ALGRMITAAA RIAEQEGVAE DGYRLIINCN RHGGQEVYHI HMHLVGGRSL GPLLSR