Gene Spro_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1889 
SymboltqsA 
ID5606312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2074443 
End bp2075495 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content56% 
IMG OID640937425 
Productputative transport protein 
Protein accessionYP_001478120 
Protein GI157370131 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000651778 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCCGAA CCCTGTTGAC CGATCGCAGC CTGCGGCTGG CCATTATGCT GGCGATGTTA 
GTGATTATTC TTGCCGGCGT GAAAGCGGCC GTGGATGTTG TGGTGCCTTT CCTGCTGGCA
CTGTTCCTCG CGATGGTGCT GAATCCGCTG GTGGCACAGC TCGAGCGCTG GCGGGTACCC
CGGGTGCTGG GTGTGAGCTT GCTGGTGGTG GTTGTGGTGG TGTTGCTGAT GCTGTTTGTC
GGTGTGCTGG GGGCATCTCT GAACGAATTT GCTCGCTCAT TGCCGCAGTA TCGCGGCTTG
ATGTTGGAAA AGTTGAGCGA ACTGCAGCAC TACGCCGACC GTTTCAACAT TACCATTTCC
ACCGAGGCGA TGCTGCAGTA CGTCGATCCC AGTGCGGCGA TGAATCTGAT CACTCGCCTG
TTGAGCCGGT TTTCCGGCGC GATGACCAAT ATCTTCCTGT TGCTGATGAC CGTGGTATTT
ATGCTGTTCG AAGTGCAGCT ATTACCTTAC AAATTGCAGC AGGCGTTGGA TAAGCCAAGT
GAAGGTATGG CCAATATACA GCGTGCGCTG GACGGCGTTA CCCGTTATCT GCTGATCAAA
ACGGCGATCA GTCTGGCGAC CGGGATTATC GTATGGGCCT TCCTTGCGGT TATTGATGTG
CGTTTTGCCT TCATCTGGGG GCTGCTGGCG TTCCTGCTGA ATTATATTCC CAATATTGGC
TCGGTGATCG CCGCCGTTCC GCCGCTGATT CAGGCTCTGT TATTTAACGG ATTTGGTGAT
GCTCTGGTAG TGGCTGCGGG CTTTATCACC ATCAATTTGG TGATTGGCAA TATGCTGGAG
CCGCGTGTGA TGGGGCGCGG GCTGGGGCTG TCAACGCTGG TGGTGTTCCT GTCATTGATC
TTCTGGGGAT GGCTGATGGG GCCGGTGGGG ATGTTGCTGT CGGTGCCCCT GACCATTATT
ACCCGTATCG CGCTGGAGAC CACCGAAGGT GGGCATAAAT TGGCGGTGAT TCTCGGTGAT
GGCCAGCCGG TTAAACCGCT TACTCCGGAG TAA
 
Protein sequence
MGRTLLTDRS LRLAIMLAML VIILAGVKAA VDVVVPFLLA LFLAMVLNPL VAQLERWRVP 
RVLGVSLLVV VVVVLLMLFV GVLGASLNEF ARSLPQYRGL MLEKLSELQH YADRFNITIS
TEAMLQYVDP SAAMNLITRL LSRFSGAMTN IFLLLMTVVF MLFEVQLLPY KLQQALDKPS
EGMANIQRAL DGVTRYLLIK TAISLATGII VWAFLAVIDV RFAFIWGLLA FLLNYIPNIG
SVIAAVPPLI QALLFNGFGD ALVVAAGFIT INLVIGNMLE PRVMGRGLGL STLVVFLSLI
FWGWLMGPVG MLLSVPLTII TRIALETTEG GHKLAVILGD GQPVKPLTPE