Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1863 |
Symbol | |
ID | 5605978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2048952 |
End bp | 2050133 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640937398 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001478094 |
Protein GI | 157370105 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCA CTCCGCGCCG CTTGGCGTTT ATCCTGATCG GTGCTCTGCT GGTCATTATT GCCCTGGTGG TATTCTCTTT ACAAAGCCCC CCGCAAGCCG CTTCGGTGAC CGCACCGGTT CGTCTGGGCG ATATTGAAAA TGCCGTACTG GCCACCGGCA AACTTGATGC GATAGAACGG GTCAACGTCG GTGCACAGGT CTCCGGCCAG GTCAAATCCC TGAAGGTCAA ACTTGGCGAC AAGGTCACCA AAGGCCAACC TATTGCCGAT ATCGACGATC TGCCACAACG CAACGACCTG CGTAACGCCG AAGCGGCGCT GAACGTCGCC AAGGCAGATT TGCAGGCCAA ACAGGCACTG TTGAAACAGG CTGAGTCCCG CTTTAAACGC CAAAAGCGCA TGTTGAGTGA TGAAGCCGGC TCCCGCGAAG ATTTTGAGAC GGCAGAGGCC ACGCTCGCCG CCACCCGCGC CGAACTGATC GCGTTGAATG CTCGCATCGT GCAGGCACAG ATTGAAGTAG ACAAGAAAAA GGTCGACCTG AGTTACACCC GTATTCTGGC GCCGATGGAT GGCATCGTTA TCGCGGTGAT TACTCAGCAA GGCCAAACGG TGAATGCCAA CCAGAGCGCG CCCACCATCG TCAAACTGGC GCAGTTGGAC GTAATGACCA TCAAGGCGCA GATTTCCGAG GCCGACATTA CCCGCGTTTC TCAGGGGCAA AAGGCCTACT TCACGATTTT CTCCGAACCC GATAAACGTT ACGACGCCAC GCTACGCACC GTTGAACTGG CGCCAGAATC GGTGATGAAA GACGATTCAG TCTCCGGTAG CAGTTCGTCC TCCGGCTCCG GTAGCTCCAA TGCTTCGGTG TATTACAACG CCTTGCTGGA CGTCCCAAAC CCGGATAACC GGCTGCGGAT TGCCATGACG GCGCAAGTTT CATTGCTGCT CGGCGAGGCG AAAAACGCAC TGTTGGTACC GATCCAAGCG GTACATAAAA CCGCAGATAA TAAGCAACAG GTACAAGTGC TGACCGGGGA CAACCGGTTG GAAATGCGCG AGGTGAAAAC CGGCATTACC AATAACGTCG ATATTCAAAT CCTGTCCGGA TTGAAGGCAG GTGAAAACGT GGTGCTGGTA CAGGAAAATA CCAAACCTGG CGAGGAAGGT CTCTCACTGT GA
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Protein sequence | MKVTPRRLAF ILIGALLVII ALVVFSLQSP PQAASVTAPV RLGDIENAVL ATGKLDAIER VNVGAQVSGQ VKSLKVKLGD KVTKGQPIAD IDDLPQRNDL RNAEAALNVA KADLQAKQAL LKQAESRFKR QKRMLSDEAG SREDFETAEA TLAATRAELI ALNARIVQAQ IEVDKKKVDL SYTRILAPMD GIVIAVITQQ GQTVNANQSA PTIVKLAQLD VMTIKAQISE ADITRVSQGQ KAYFTIFSEP DKRYDATLRT VELAPESVMK DDSVSGSSSS SGSGSSNASV YYNALLDVPN PDNRLRIAMT AQVSLLLGEA KNALLVPIQA VHKTADNKQQ VQVLTGDNRL EMREVKTGIT NNVDIQILSG LKAGENVVLV QENTKPGEEG LSL
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