| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1833 |
|---|
| Symbol | |
|---|
| ID | 5605629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2017190 |
|---|
| End bp | 2017906 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640937365 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001478064 |
|---|
| Protein GI | 157370075 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.873673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCC ACCTTCAGCC TTTGATGGAT GCCTTACTGA CCAGTCAGCC AGACCGCAAG
GTTTTTTTAA GCCAACTGGC ACCCTGTGCC CAGGCTTTGG GTTTTGAATA CTTTTCTTAC
ACGGTCTTTT CCTGCTACCC GGCCAGCCGA CCCAAAATGC TGATAGAGGG CAATTTCCCC
GAGTGCTACC TGGAGGACTA TCGCAAGCTG CGGGTCTACC TGCAGGATCC GGTGATTGAG
CAGGCCCACC ACTCCACGCT GCAATTTTAC TGGGACGAAC ATTTCTACCA GGACAAGCCA
GAGCTGTGGT GGCGTATGGC CCAGTTTGGT ATTCGCGAAG GCTGGTCGCA GTCGGTCAAG
GATTGCTATG GCCGACTGGG TATTCTCACC TTTGCCGGAA AAAGCATTCC CGTTCAGTCA
CCACAGGCCA GCGCACGTAA CGAAACCTTT TTCCTGTGGT TGGCGCAGAT GGTTCATAAA
ACGCTGCGTG AAGCATTAAT CTCGGTGAAC GACGAGGCAA TCAAAGATGT GCTGACGCTG
CGCGAAAAAG ATATTTTGCG CTGGTGCAGC GAAGGTAAAA CCTCGGAAGA GACCGCTCTG
CTAATGGGGC TGAGTGAGCG GACGGTGAAT TTCCACATTG GCAATTCGAT TAAGAAGCTG
TCGGTGGCCA ATAAAACCGC CGCCACGGCG AAGGCGGTGT ATTTACAGCT TATTTAA
|
|---|
| Protein sequence | MDTHLQPLMD ALLTSQPDRK VFLSQLAPCA QALGFEYFSY TVFSCYPASR PKMLIEGNFP
ECYLEDYRKL RVYLQDPVIE QAHHSTLQFY WDEHFYQDKP ELWWRMAQFG IREGWSQSVK
DCYGRLGILT FAGKSIPVQS PQASARNETF FLWLAQMVHK TLREALISVN DEAIKDVLTL
REKDILRWCS EGKTSEETAL LMGLSERTVN FHIGNSIKKL SVANKTAATA KAVYLQLI
|
|---|
| |