Gene Spro_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1832 
Symbol 
ID5605628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2015313 
End bp2016842 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content55% 
IMG OID640937364 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001478063 
Protein GI157370074 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.823953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA ATAATTCGGC AATCCATTCG GTCGCTGTTA TTGGTGCCGG GACCATGGGC 
AGAGGTATTG CCTATCTTCT GGCGCAAAAC GGCATACGAA CCCTGCTTTA TAATCGTAGC
GGTAATAATC TGAATCAGGC CAGGGACTAT ATTATTCGTG ACCTGGATAA GAAAATAGAT
GGCGGAAAAA TAAGCCCGCA GAAAAAAGGC GAGATATTGG CCAATCTGGT TTTCTCTCCC
ATTTTCGAGG CTATTGCCGA CAGCGATCTG GTGATTGAAA CCATCGCGGA ACATGAGGCA
ACCAAGCATG AGATCCTCGC GGCGATTGCG GCCACGGTGA AAAAAGAGGC GATTATCGCC
ACCAATACCT CCTCGCTGTC ATTGAATAAG CTGGCCGCAG GCGTCGAAAA TAACGCCCGG
TTTATCGGCC TGCACTTCTT CAATCCGGCC CCGCTGATGA AACTGATCGA AATTATTCCG
TCTTACTTTA CCAGCCGGGC CACCAGCCTG CGTTGCCAGC AGTTGGTGAC GGCGATAGGC
AAACAGTTTG TGGTCTGCAA AGCCACGCCG GGCTTTATCG TCAACCGGAT GGCGCGACCT
TTTTATCTGG AAGGGTTCCG GCTGTTGGAA GAGAACGTGG CGCTGGCGCC GCAGATCGAC
CGCGCACTCA AGGCCGGTGG CCACTTTCGC ATGGGACCTT TAGAGCTGAC CGATTTTATC
GGCCAGGATA TTAACTATCA GGTCAGCAGC CAGATTTGGC AGGACATGCA GTACGATCCC
CGCTATACCC CCGGCCATTT GCAACGTTCG CTGGTGGATG CCGGGCTGCT GGGGAAGAAA
AACGGCCGAT CCTTTTTTAC CCCCTCTTCC GCCGAACCCA GCTCCGCCGA TGCAGGTAGC
GGCACGCCGA CCTCACTGAA TTTTTATGGT GAACATCCCC TGTTCGACCT GTTGCAACAG
CGCGCTTTGG CGCTCTGGCC AAGGGTGCAG ATTAATCGCC AATCGGAACA GCCAACGCTG
GGCCGCTTTA TCCGGGTGAA TGACGCAATG GCCATCAAAA TCACCGATGG CCGCACCGCC
AATCTGCTGG CTGAATTGAC CGAACTCGAT ACCTTCGTGA TCGACGCCGC GCTCAACTAC
GCCGATACCG CCTATCTGGC GGCTGCCCAC AGCCAGGATG CCAGCGCGGC CAATAAAGCG
CTGTTTCTGA CGCTGCTGCA AACGTTGATC CCGCAGGTGG AGTTTATTAA AGACTCCCCG
GGCCTGATTG TCGCCCGCGT CCTGAGCAGC CTGATCAATG AGTCGGTGAT TATGGTGGAG
AGCGGGGTTT GCAGCCGGGC GGACATCGAT ATCGCCGCGG TGGCCGGCGT TAACTATGCC
GATGGCATCT TTAGCTGGCT GGCGCAGCTT GGGCAAAAAA ACGTGAAGTC GACGCTGGAC
AATATGGCGC AACTGCTGCA TTCCGCCCGC TATTACCCGC ATTACTCTTT GCTCAATACC
CCCCGGCCAG AGCTGGCCGT CGCGCCCTAA
 
Protein sequence
MAENNSAIHS VAVIGAGTMG RGIAYLLAQN GIRTLLYNRS GNNLNQARDY IIRDLDKKID 
GGKISPQKKG EILANLVFSP IFEAIADSDL VIETIAEHEA TKHEILAAIA ATVKKEAIIA
TNTSSLSLNK LAAGVENNAR FIGLHFFNPA PLMKLIEIIP SYFTSRATSL RCQQLVTAIG
KQFVVCKATP GFIVNRMARP FYLEGFRLLE ENVALAPQID RALKAGGHFR MGPLELTDFI
GQDINYQVSS QIWQDMQYDP RYTPGHLQRS LVDAGLLGKK NGRSFFTPSS AEPSSADAGS
GTPTSLNFYG EHPLFDLLQQ RALALWPRVQ INRQSEQPTL GRFIRVNDAM AIKITDGRTA
NLLAELTELD TFVIDAALNY ADTAYLAAAH SQDASAANKA LFLTLLQTLI PQVEFIKDSP
GLIVARVLSS LINESVIMVE SGVCSRADID IAAVAGVNYA DGIFSWLAQL GQKNVKSTLD
NMAQLLHSAR YYPHYSLLNT PRPELAVAP