Gene Spro_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1820 
Symbol 
ID5605394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2003724 
End bp2004527 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID640937352 
Productalpha/beta hydrolase fold 
Protein accessionYP_001478051 
Protein GI157370062 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR03611] pyrimidine utilization protein D 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.65199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0137069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTTG AGATTTTGGG AAAAGACACG CCGTTGGCAC CCACGCTGGT GCTGTCTGCC 
GGGCTGGGTG GCGCAGGCAG TTTTTGGCAA CCGCAGATTA ACGCGCTGGG CGAGCACTTC
CGGGTAGTGG TTTACGATCA CTTCGGTACC GCTCGCAGCA AAGGGAGCGT GCCGGACGGC
TACAGCATGG CCGATATGGC CGATGAAGTG GCGCAGTTGC TGCGTTCACT CAACGTCGAC
TGCTGTTACT TCGTCGGCCA TGCACTGGGC GGCATGATTG GCCTGCAATT GGCGCTCACT
CATCCGCAAC TGGTCGAAAA ACTGGTGGTG GTCAACGGCT GGCCGACGCT GGACAGCCAG
ACCCGCCGCT GCTTCAAAGT ACGTCAGGAT CTGTTGCTCA ACAGCGGCGT GGAAGCCTAT
GTGCGCGCTC AGCCGCTGTT CCTGTTCCCC GCCGACTGGC TGTCGCAGCA CTCCGCCTTG
CTGGATGAAG AGTTGCAGCA CCAGACCGCA CATTTTCAGG GTACCGAAAA CCTGCTTCGC
CGTCTGACTG CGCTGATGAA TACCGATTTC CGTCCGCACC TGGCGGACAT TACCACGCCA
ACCCTGGCGC TGTGCTCCCG CGACGATTTG CTGGTGCCCT ATCACTGCTC GCATCAGTTG
GCGGCCAGCC TGCCGAACGG CGAACTGGCC GAGATGGCCT ACGGCGGCCA TGCGATGAGC
GTGACCGACA CCGAGCACTT TAACCGCATC CTGCTGGGTT GGCTGTTGAA AACGCAAAAC
GCCCAAACCC GCCTGCAACC CTAG
 
Protein sequence
MYFEILGKDT PLAPTLVLSA GLGGAGSFWQ PQINALGEHF RVVVYDHFGT ARSKGSVPDG 
YSMADMADEV AQLLRSLNVD CCYFVGHALG GMIGLQLALT HPQLVEKLVV VNGWPTLDSQ
TRRCFKVRQD LLLNSGVEAY VRAQPLFLFP ADWLSQHSAL LDEELQHQTA HFQGTENLLR
RLTALMNTDF RPHLADITTP TLALCSRDDL LVPYHCSHQL AASLPNGELA EMAYGGHAMS
VTDTEHFNRI LLGWLLKTQN AQTRLQP