Gene Spro_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1818 
Symbol 
ID5605392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2001806 
End bp2003125 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content59% 
IMG OID640937350 
Producturacil-xanthine permease 
Protein accessionYP_001478049 
Protein GI157370060 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03616] pyrimidine utilization transport protein G 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0927145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00233017 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAATA CCTGGTTTCC CCAATGGCGC ATGAAACAAG GCAGTCTGGA CGGTTCGATT 
GTCGCGCCCG ATGAACGGCT TTCGCTGGCG CAAACGCTGG TGATGGGGTT GCAACATGCA
GTGGCAATGT TTGGTGCCAC GGTGCTGATG CCACTGCTGA TGGGCTTTGA CGCCAATCTG
GCCATTCTGA TGTCCGGCAT CGGCACGCTG CTGTTTTTCC TGGTGGTGGG CGGCCGGGTG
CCAAGCTATC TCGGTTCCAG CGCGGCGTTT GTCGGGCTGG TGATCACTCT GACCGGCTAC
GGTGGCCAGG GCGCTAACCC GAACATTGCA CTGGCGCTCG GCGGCATTAT CGCCTGTGGC
CTGGTGTACC TGCTGATCGG CCTGGTGGTG ATGAGCGTGG GTACCCGTTG GATCGAACGC
CTGATGCCGC CGGTGGTGAC CGGTGCCGTG GTGATGGCGA TTGGCCTTAA CCTGGCGCCT
ATCGCGGTGC GCAGCGTTTC AGCCTCCAAC TTTGACAGTT GGATGGCGGT GACCACTATT
TTGTGTATTG GCTCGGTCGC GGTATTCACC CGCGGGCTGA TGCAGCGGCT GTTGATCCTG
GTGGGATTGA TCGCCGCCTA TTTAATCTAC GTGATAGCCA CCAACGGCTT TGGGCTTGGC
AAACCGGTGG ATTACAGCGC ACTAAGCCAG GCAGCCTGGT TCGGCCTGCC ACAGTTCACC
ACGCCGGTGT TTAACCTGCA CGCCATGTTG CTGATTGCTC CGGTGGCGAT CATTCTGGTG
GCGGAAAACC TCGGGCATGT CAAAGCGGTG GCGGGCATGA CCGGCCGCGA TCTTGACCCT
TATATCGGCC GCGCCTTCGT CGGCGATGGG CTGGCGACCA TGCTATCCGG TTCGGTGGGC
GGTACCGGGG TGACGACCTA TGCCGAGAAT ATCGGCGTAA TGTCAGTAAC CAAAATTTAC
TCTACGTTGG TGTTTGTCGC GGCGGCGTTA GTAGCTATTG TGCTGGGGTT TTCACCAAAA
TTCGGCGCGC TGATCCACAC CATTCCCGGC CCGGTTTTGG GCGGTGCTTC GGTAGTAGTG
TTCGGTCTGA TCGCCGTCGC CGGTGCGCGC ATCTGGGTGC AAAACAAAGT AGACCTGGGC
GATAACGGCA ACCTGATTAT GGTTGCGGTC ACGCTGGTAC TGGGTGCAGG CGATTTTGCA
CTGACTATCG GTAACTTCAC CATGGGCGGG ATAGGCACGG CCACTTTCGG GGCCATTATC
CTTAATGCCC TGCTGCGCAG GCGTAAAGCG CTGCCGCTGG CAGACAGTGC CGTACGTTAA
 
Protein sequence
MANTWFPQWR MKQGSLDGSI VAPDERLSLA QTLVMGLQHA VAMFGATVLM PLLMGFDANL 
AILMSGIGTL LFFLVVGGRV PSYLGSSAAF VGLVITLTGY GGQGANPNIA LALGGIIACG
LVYLLIGLVV MSVGTRWIER LMPPVVTGAV VMAIGLNLAP IAVRSVSASN FDSWMAVTTI
LCIGSVAVFT RGLMQRLLIL VGLIAAYLIY VIATNGFGLG KPVDYSALSQ AAWFGLPQFT
TPVFNLHAML LIAPVAIILV AENLGHVKAV AGMTGRDLDP YIGRAFVGDG LATMLSGSVG
GTGVTTYAEN IGVMSVTKIY STLVFVAAAL VAIVLGFSPK FGALIHTIPG PVLGGASVVV
FGLIAVAGAR IWVQNKVDLG DNGNLIMVAV TLVLGAGDFA LTIGNFTMGG IGTATFGAII
LNALLRRRKA LPLADSAVR