| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1815 |
|---|
| Symbol | |
|---|
| ID | 5605360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1999297 |
|---|
| End bp | 2000220 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640937347 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001478046 |
|---|
| Protein GI | 157370057 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00510599 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000707933 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG ACGATATCGG TGAGAAAAAC TCACGCAAGA TAAACCGACC TCTGTCATTA
GGGGGCTTGC GTTGTTTTGA GGCTGCTGCA CGGTTGGAAA GCTTTACCCA GGCGGCAAAC
AGCCTGAGCC TGACGCACGG CGCGGTTAGC CGAGCGGTCA GGGCGCTGGA AGATGAACTT
GGCGTTGCGT TGTTCGAACG TCGCCATCGG CGGGTATATT TGACCACCGC CGGGAGAGTG
CTGCTGCAAG CTTCACAACA GGCGTTTGGC ATTCTGGAAC ATACGGCACA AACTCTGCGA
CAGCAGGCAC AGGATGCACC GCTGGTATTA TCTTGCGAGC CGACGCTGTT AATGCGTTGG
CTGATACCGC GTTTGCCGGC TTTTCAGCTG GCACATCCTG ACATCAACCT GCAGTTGGTT
GCGGGTGGTG GGCCGTTTTC GTTTAAAGAC GGTATTAGCG CCGCTATCCG TCGTAACGAT
TTTGATTGGG GCGATAAGCT GCATAGCGTG ACGCTGTTCG ATGAGCGGGT TGGGCCGGTG
TGCAAATCTG AAATGGTGCC GCGTTTTATT GCCGTTAATG ATGGCCAGCC CTCCTTGAAC
CATGACGCCG TATTGCTGCA CTCAGCGACC CGGCCTGACG CTTGGCGGCA GTGGGCACAG
CAGCAGGGTG TGGCACTCAA GGGGCAACCG GAGCAGCGTT TCGATCACTT TTACTTCAGC
TTGCAGGCGG CGGTGGCGGG GGTAGGTGTC GCTATCGGTC CGTGGCAGCA GGTGCGTGAT
GACGTTGCCT CGGGGCTATT GAGCGCTCCT TTTGGCTTCA TGCCAGACGG CAGCGGTTAC
TGTTTGCTGA CGCCGCAGGA AATCCGGCCG GGCAGTGCTC TGGCCCGGCT GGCCGATTGG
CTGAAACTCA GTGCCGATGG CTAG
|
|---|
| Protein sequence | MKTDDIGEKN SRKINRPLSL GGLRCFEAAA RLESFTQAAN SLSLTHGAVS RAVRALEDEL
GVALFERRHR RVYLTTAGRV LLQASQQAFG ILEHTAQTLR QQAQDAPLVL SCEPTLLMRW
LIPRLPAFQL AHPDINLQLV AGGGPFSFKD GISAAIRRND FDWGDKLHSV TLFDERVGPV
CKSEMVPRFI AVNDGQPSLN HDAVLLHSAT RPDAWRQWAQ QQGVALKGQP EQRFDHFYFS
LQAAVAGVGV AIGPWQQVRD DVASGLLSAP FGFMPDGSGY CLLTPQEIRP GSALARLADW
LKLSADG
|
|---|
| |