Gene Spro_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1802 
Symbol 
ID5605206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1985369 
End bp1985914 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID640937334 
Producthypothetical protein 
Protein accessionYP_001478033 
Protein GI157370044 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.56234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0484163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTACCTA CCAATTTGAC TAAAACCGTA CGCTGGCAGC TCGCGCTGCT GGCGTTCAGC 
CTGACGGGCT GTGGGGTGAC GCAGAGCGTC ACGGACGGCA CAAAGTCGGC CTTCACCGCC
GTTTTTTACA AGAAGATTAA AATCCTGCAT CTGGATTTTA CCGCGCGCGA GGCGCTCAAT
ACCGATGCCC GAGAGAGCAA TTCGCTGTCG GAGCCGGTTG TGGTGCGCGT TTACCAGTTG
AAAGACCGCA AAACCTTCGA CAAGACGGTG TATCAGCAAC TGCTGAAAGA CGGCGACACC
CTCCTGAAAA CCGATTTGCT GGCCACCCGC GATGTGGTGG TAAAACCGGG CGGCGATGCC
AGCCTCAATA TGCCCATGGA AGCCGATGCG AAGTTTGTGG CGGTCGCGGG GCTGTTCCGT
CATCCGGATT TGGTTAATAA CACCTGGAGG CGGGTGATTG AGCGTGAAGA GCTGGACCCG
GATAAGCCGC GCATCCTGGA GGCCGGGAAT AACTATCTGA CATTGCTACC CGCTAAGGAC
GATTAA
 
Protein sequence
MLPTNLTKTV RWQLALLAFS LTGCGVTQSV TDGTKSAFTA VFYKKIKILH LDFTAREALN 
TDARESNSLS EPVVVRVYQL KDRKTFDKTV YQQLLKDGDT LLKTDLLATR DVVVKPGGDA
SLNMPMEADA KFVAVAGLFR HPDLVNNTWR RVIEREELDP DKPRILEAGN NYLTLLPAKD
D