Gene Spro_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1787 
Symbol 
ID5605079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1963068 
End bp1964777 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content61% 
IMG OID640937319 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001478018 
Protein GI157370029 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG CACAACAGCG TGGGCTTGCG CTGTGGGCCG TCCTGCTGAG TGCAGTGGTC 
TGCCTGGTTT TTCTGCCTGC ATCCCGGCTG GTGTCCGTTC TTGTTTTTCT GGTTGTTCTG
GGGCTGATTG CGGCGTCCTG GTACGTCGCC AGTCGTCGTG TTCAGCACGA CGTCACCCTG
AGTCTGCAAG CTCTCCCGGA GGCGGCATAT CGCCAGCCGG TGGTGTTGGT CTGTGGCGAT
CTGTCGTTGG CCTGGCCGGA ACCGTTACCG GTGCTGACCG TCACTCAGGG GTGTTGGATC
CGGGTGGAAG ACCACCAGAG CCTGGAGCAG GTGGCCCGAC AGGTACTGTG GCAGCGCCCT
GACTGGGGGC GTCAGCTGTC GGTGATGGTC AGTGTCTGCC CGCAGAAGCA CGCTGACTGC
GAAGCACTGA CCAGCCGCCT GCTGACTCTG CGCTGGCAAA TCAGCCGGTT GCGTAAGGAT
ACCGGGCATT CCGTGCCGCT GGTTTTGAAT GGTCAGGTCG GCAGCGCGAT GACGAATGAG
CTGCTCTGGC AGGCGGCGAT CCCGGAAGAA GGGGTGAGGG TCTGGCGGGA GTCTTCAGCA
CCGAGTTCTA TCGCCGCATG GGTCACTACC GGCGGAACGC CAGCAATGCA GCAACAGGTG
CTGATGAACA GCCTGATGAG CTGGTTCCAT CAGCACGTCA ATGCCGTCTT TTTGGATGAA
AACCCCGATG TTCAGGCCAT TGCACCTACA GCGGTGCTGT GGGGAATGGG GCCTATCCTT
GCCGGGAGCC TGGCGTCATC GGCCTGGACG GCGTGGTTGT CGCGTCACAC CGCCATGCAG
CAGGTGACGG GTTGGCAGCC GGTGGGGACG GACAGCTCGG TGATATCACC ATTCCCGGAT
TTCGTCCTGC CGCTGCTGCC GGAAGGGCGA GGATTAACCT CGCGGGGGCG TGCCTGGCGC
TGTGCACTCG GGATCTTCAC TCTGGCGGCC ATTGCGGCGC TGCTCAGCAG TGGCTGGAAC
AATCGCCAGC TGCTGCACCG CGTAAGCTTC GATATTGCCC GGTATGACCA TATCCCGATA
GATGATTACG GTCCGAAAAC CGATGCCGTC GCGGTCCTGC GAGAGGATGC CGCGCAGCTG
GATGACCAGG CGCGTAATGG CGTACCGACC CGGATGAGCC TCGGCCTGTA TCAGGGCGAG
CGTCTGCGTA TGCCGCTGCT GGATGCGATC CGCTCGTATG TTCCGCCGCC ACTGCCGTCC
AAACCTCAAC CGAAGCCTGC CCCGAAAATT GTGCGGCTCG ACAGCATGTC GCTGTTCGAT
TCCGGTAAAT ACGCGCTGAA GGCGGGCTCC ACCAAAATGC TCATTAACTC CCTTGTGGGC
ATCAAAGCCA AGCCGGGCTG GCTGATTGTG GTGGCAGGCC ACACGGATAA CACCGGCAAT
CCAGCACTCA ATCAGACGCT TTCCCAGAAA CGTGCCGCAG CAGTACGTGA CTGGATGCGT
GATACCGGCG ATGTGCCGGA AAGTTGTTTT GCGGTGCAGG GCTATGGCGA AAGTCGGCCG
GTTGCCACCA ATGACACTCC GGAAGGCCGT GCGCTTAACC GGCGTGTCGA AATCAGTCTG
GTACCTCAGG CAGATGCCTG CCGGATACCG GGCAACACCC CGACGTCATC ACTGGATGGT
GACGTATCAA AAAACGAAAT GGAGAAGTAA
 
Protein sequence
MSSAQQRGLA LWAVLLSAVV CLVFLPASRL VSVLVFLVVL GLIAASWYVA SRRVQHDVTL 
SLQALPEAAY RQPVVLVCGD LSLAWPEPLP VLTVTQGCWI RVEDHQSLEQ VARQVLWQRP
DWGRQLSVMV SVCPQKHADC EALTSRLLTL RWQISRLRKD TGHSVPLVLN GQVGSAMTNE
LLWQAAIPEE GVRVWRESSA PSSIAAWVTT GGTPAMQQQV LMNSLMSWFH QHVNAVFLDE
NPDVQAIAPT AVLWGMGPIL AGSLASSAWT AWLSRHTAMQ QVTGWQPVGT DSSVISPFPD
FVLPLLPEGR GLTSRGRAWR CALGIFTLAA IAALLSSGWN NRQLLHRVSF DIARYDHIPI
DDYGPKTDAV AVLREDAAQL DDQARNGVPT RMSLGLYQGE RLRMPLLDAI RSYVPPPLPS
KPQPKPAPKI VRLDSMSLFD SGKYALKAGS TKMLINSLVG IKAKPGWLIV VAGHTDNTGN
PALNQTLSQK RAAAVRDWMR DTGDVPESCF AVQGYGESRP VATNDTPEGR ALNRRVEISL
VPQADACRIP GNTPTSSLDG DVSKNEMEK