Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1787 |
Symbol | |
ID | 5605079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1963068 |
End bp | 1964777 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640937319 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001478018 |
Protein GI | 157370029 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCTG CACAACAGCG TGGGCTTGCG CTGTGGGCCG TCCTGCTGAG TGCAGTGGTC TGCCTGGTTT TTCTGCCTGC ATCCCGGCTG GTGTCCGTTC TTGTTTTTCT GGTTGTTCTG GGGCTGATTG CGGCGTCCTG GTACGTCGCC AGTCGTCGTG TTCAGCACGA CGTCACCCTG AGTCTGCAAG CTCTCCCGGA GGCGGCATAT CGCCAGCCGG TGGTGTTGGT CTGTGGCGAT CTGTCGTTGG CCTGGCCGGA ACCGTTACCG GTGCTGACCG TCACTCAGGG GTGTTGGATC CGGGTGGAAG ACCACCAGAG CCTGGAGCAG GTGGCCCGAC AGGTACTGTG GCAGCGCCCT GACTGGGGGC GTCAGCTGTC GGTGATGGTC AGTGTCTGCC CGCAGAAGCA CGCTGACTGC GAAGCACTGA CCAGCCGCCT GCTGACTCTG CGCTGGCAAA TCAGCCGGTT GCGTAAGGAT ACCGGGCATT CCGTGCCGCT GGTTTTGAAT GGTCAGGTCG GCAGCGCGAT GACGAATGAG CTGCTCTGGC AGGCGGCGAT CCCGGAAGAA GGGGTGAGGG TCTGGCGGGA GTCTTCAGCA CCGAGTTCTA TCGCCGCATG GGTCACTACC GGCGGAACGC CAGCAATGCA GCAACAGGTG CTGATGAACA GCCTGATGAG CTGGTTCCAT CAGCACGTCA ATGCCGTCTT TTTGGATGAA AACCCCGATG TTCAGGCCAT TGCACCTACA GCGGTGCTGT GGGGAATGGG GCCTATCCTT GCCGGGAGCC TGGCGTCATC GGCCTGGACG GCGTGGTTGT CGCGTCACAC CGCCATGCAG CAGGTGACGG GTTGGCAGCC GGTGGGGACG GACAGCTCGG TGATATCACC ATTCCCGGAT TTCGTCCTGC CGCTGCTGCC GGAAGGGCGA GGATTAACCT CGCGGGGGCG TGCCTGGCGC TGTGCACTCG GGATCTTCAC TCTGGCGGCC ATTGCGGCGC TGCTCAGCAG TGGCTGGAAC AATCGCCAGC TGCTGCACCG CGTAAGCTTC GATATTGCCC GGTATGACCA TATCCCGATA GATGATTACG GTCCGAAAAC CGATGCCGTC GCGGTCCTGC GAGAGGATGC CGCGCAGCTG GATGACCAGG CGCGTAATGG CGTACCGACC CGGATGAGCC TCGGCCTGTA TCAGGGCGAG CGTCTGCGTA TGCCGCTGCT GGATGCGATC CGCTCGTATG TTCCGCCGCC ACTGCCGTCC AAACCTCAAC CGAAGCCTGC CCCGAAAATT GTGCGGCTCG ACAGCATGTC GCTGTTCGAT TCCGGTAAAT ACGCGCTGAA GGCGGGCTCC ACCAAAATGC TCATTAACTC CCTTGTGGGC ATCAAAGCCA AGCCGGGCTG GCTGATTGTG GTGGCAGGCC ACACGGATAA CACCGGCAAT CCAGCACTCA ATCAGACGCT TTCCCAGAAA CGTGCCGCAG CAGTACGTGA CTGGATGCGT GATACCGGCG ATGTGCCGGA AAGTTGTTTT GCGGTGCAGG GCTATGGCGA AAGTCGGCCG GTTGCCACCA ATGACACTCC GGAAGGCCGT GCGCTTAACC GGCGTGTCGA AATCAGTCTG GTACCTCAGG CAGATGCCTG CCGGATACCG GGCAACACCC CGACGTCATC ACTGGATGGT GACGTATCAA AAAACGAAAT GGAGAAGTAA
|
Protein sequence | MSSAQQRGLA LWAVLLSAVV CLVFLPASRL VSVLVFLVVL GLIAASWYVA SRRVQHDVTL SLQALPEAAY RQPVVLVCGD LSLAWPEPLP VLTVTQGCWI RVEDHQSLEQ VARQVLWQRP DWGRQLSVMV SVCPQKHADC EALTSRLLTL RWQISRLRKD TGHSVPLVLN GQVGSAMTNE LLWQAAIPEE GVRVWRESSA PSSIAAWVTT GGTPAMQQQV LMNSLMSWFH QHVNAVFLDE NPDVQAIAPT AVLWGMGPIL AGSLASSAWT AWLSRHTAMQ QVTGWQPVGT DSSVISPFPD FVLPLLPEGR GLTSRGRAWR CALGIFTLAA IAALLSSGWN NRQLLHRVSF DIARYDHIPI DDYGPKTDAV AVLREDAAQL DDQARNGVPT RMSLGLYQGE RLRMPLLDAI RSYVPPPLPS KPQPKPAPKI VRLDSMSLFD SGKYALKAGS TKMLINSLVG IKAKPGWLIV VAGHTDNTGN PALNQTLSQK RAAAVRDWMR DTGDVPESCF AVQGYGESRP VATNDTPEGR ALNRRVEISL VPQADACRIP GNTPTSSLDG DVSKNEMEK
|
| |