| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1733 |
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| Symbol | |
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| ID | 5604625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 1907740 |
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| End bp | 1909446 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640937265 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001477965 |
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| Protein GI | 157369976 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0602531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.409385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAA AATATCTGAT CTATTTTTTT ACCTTTGCCC TGATGTCCTC TTTCGCCCTG
TTCATTTCCG ACGAGTTGGT CGAGGCCGAA ACCGGCTATC GCGACAACCA GCTTAACCTC
TACAAAATTA CCCGCGCCAA GCAGATTTCA GAGGCTTTTC AGGCCACCTT ATTGGCGCAC
CGTCTGAAAC GCCTGAGCCT GGTCGATCCT CATATTACTT CGCAGCAATG GCAGGAAGCG
GATCGAATAG CTCGGGAGAA AATTGCCCGC TTTCGCCCCC ATATTGACAG TGATATCTCG
CAACAGCTTG GCATTCGGCA AAAAATCGCT GCACTCTCCA TGCTCAACCT GATGGAACAA
TTGCTCAATA GTGACAATCT GCAGCTTTCG CTCGTTACCG ATGCCAATGC CAACGCCAAC
CTGTTTAATA TCAACAGCGC CTACTACATT TCTCAGGCCA GCAAAAGCTA TTACCGCTAT
AGCTACGACA ACCGCATGGT CGATGCCGAT TCCTTTCTGT TTCTGGAAGC CGTACGGCTG
AATAACCGGC TGAACCTGTC CGTCACCGAA CTTATCGATC AGGTTATCGA TGTCAATATC
AACCCGTTGG AGCGTAAAGT CGCTTATTTG AAAGCCGTTC AGCTCACCGG GGTATTAAGT
TCATTAAGCG CCCGGCTGAT ATTTATGAAG CTGAGCTATA ACGATGTGCA AACCACGTTC
CTGGTGAATG ATATTCTTGA GCAAATATCG ACCAAAAAGA TCGGCCAGAT TACCAACGGA
CTCTATACTG CCGTCGATAC TCACAGCCTC TATCCCGCCA GTTCGATTTA TCAGTACGTT
AAAAACCTGA CAGAGCTTTC ACAACGGCTT TTCCAGCGTA GTTTTGAAAT GGAGATCGCC
GCCTCTCAGC ATAAGATCTA TAACAGCCAG ACCGCCATTT ACGGCATGAT TTCCCTGGGT
GGCCTGATCG CCCTGTTTAT TTTTCTGCCA ACGCTGGTTT ACTGTTCAAA TATCAGCCGC
TGGTTAACGA AAACGCATAA TAATATTTTT CGGCTGTCGC GCGGGAATAT GAACATAGTG
CCTAATGAGG TGTTTTACGG CCAGGAGTTA ATGGCCATCA GCGATGCCAT TAAACAACTC
AAACAGTATC AGTTGGAAAA GGTCACGCTA GAAAACGAAA AGCATCTGCT GATCAAAGAG
CTGGAAGCCT CTTCATTCCT TGACCCCTTG ACCAACATCT ATAACCGGCG CAAATTTTTC
CGCGAGTGCG AATCGCTGGC CGCCAGCAGC TACCCGCTGG CCTTCTGCCT GATTGATATT
GATAACTTCA AAAATCTCAA CGATAACTAC GGTCACCACA TAGGTGACCA GGTGTTGGTG
GCATTCGGCA AACTGCTGCA AAGCACCTTC CGCTCCAGTG ATATTTTCTG TCGCTATGGC
GGTGAGGAAT TCGCCGTGAT CCTCGGGAAC TGTACGCTGG AGAATGCACG CGAAGTAATA
TCCAAGCTAC GCGAGCGAAC TCATCAATTC ACCCTGACAC TGGCCGATGG GCAAAAGGTC
CGCTTCACTA CCAGTTGCGG CATTGCACAG GTAAGCGATA TCCGGCTGCT GCCAACGGCG
ATCAAACAGG CGGATGAAGC GCTCTATTTC AGTAAAAATA ACGGTAAGGA CCGGATCGGC
ATTTACACCC CAACCGGTTT TATCTGA
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| Protein sequence | MKVKYLIYFF TFALMSSFAL FISDELVEAE TGYRDNQLNL YKITRAKQIS EAFQATLLAH
RLKRLSLVDP HITSQQWQEA DRIAREKIAR FRPHIDSDIS QQLGIRQKIA ALSMLNLMEQ
LLNSDNLQLS LVTDANANAN LFNINSAYYI SQASKSYYRY SYDNRMVDAD SFLFLEAVRL
NNRLNLSVTE LIDQVIDVNI NPLERKVAYL KAVQLTGVLS SLSARLIFMK LSYNDVQTTF
LVNDILEQIS TKKIGQITNG LYTAVDTHSL YPASSIYQYV KNLTELSQRL FQRSFEMEIA
ASQHKIYNSQ TAIYGMISLG GLIALFIFLP TLVYCSNISR WLTKTHNNIF RLSRGNMNIV
PNEVFYGQEL MAISDAIKQL KQYQLEKVTL ENEKHLLIKE LEASSFLDPL TNIYNRRKFF
RECESLAASS YPLAFCLIDI DNFKNLNDNY GHHIGDQVLV AFGKLLQSTF RSSDIFCRYG
GEEFAVILGN CTLENAREVI SKLRERTHQF TLTLADGQKV RFTTSCGIAQ VSDIRLLPTA
IKQADEALYF SKNNGKDRIG IYTPTGFI
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