Gene Spro_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1728 
Symbol 
ID5604508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1901091 
End bp1901738 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content57% 
IMG OID640937260 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001477960 
Protein GI157369971 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.012976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC ACATTATTCC CGTTACCGCT TTTAGTCAGA ACTGCAGCCT GATCTGGTGT 
GAGAGCACCC AGCAGGCGGC GTTGGTCGAT CCCGGCGGTG AACCTGAAAA ACTGAAGGCC
GAAATAGCCA GGCAGGGCGT AACCGTTACG CAGATCCTGC TGACGCATGG TCATCTCGAT
CACGTTGGCG CGGCCGCTGA GTTGGCAGAG TTTTATCAGG TACCGATCTA CGGCCCGGAT
AAGAGGGATG CTTTCTGGCT CGATGGCCTG CCTGCGCAGA GCCGCATGTT TGGGCTGGAA
GAGTGCGCAC CGCTGACGCC AACCCAGTGG CTGGAAGAAG GGGATAGCGT GCAGGTGGGC
GAAATGACGC TCAAGGTGCT GCATTGCCCT GGCCACACTC CTGGCCATAT CGTGTTTATT
AATGATCAGG CGCGATTGGC GCTGGTGGGC GACGTGCTGT TTAACGGCGG CGTCGGGCGC
AGTGATTTCC CTCAAGGCGA TCATCAGGCG TTGATTAACT CTATCCGCAC CAAGTTATTG
CCGCAGGGTG ATGACATGGC GTTTATTCCA GGTCATGGGC CAATGTCGAC CTTCGGTCAA
GAACGTGAAA CCAACCCGTT CCTGCGTGAA GAGCCGGCCA TCTGGTAA
 
Protein sequence
MKYHIIPVTA FSQNCSLIWC ESTQQAALVD PGGEPEKLKA EIARQGVTVT QILLTHGHLD 
HVGAAAELAE FYQVPIYGPD KRDAFWLDGL PAQSRMFGLE ECAPLTPTQW LEEGDSVQVG
EMTLKVLHCP GHTPGHIVFI NDQARLALVG DVLFNGGVGR SDFPQGDHQA LINSIRTKLL
PQGDDMAFIP GHGPMSTFGQ ERETNPFLRE EPAIW