Gene Spro_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1688 
Symbol 
ID5604235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1851688 
End bp1852305 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content55% 
IMG OID640937220 
Productdimethylsulfoxide reductase chain B 
Protein accessionYP_001477920 
Protein GI157369931 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0721319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGC AATATGGATT CTTTATCGAT TCAAGTCGTT GCACCGGCTG CAAAACCTGC 
GAACTGGCCT GCAAAGACTA TAAAAACCTG ACGCCGGACG TTAGCTTCCG CCGTGTCTAC
GAATATGCCG GGGGTGATTG GCAACAGGAT GGCGAAGGCT GGCAACAAAA CGTGTTTGCC
TATTACTTGT CGATCGCCTG CAACCATTGT GAAGATCCTG CCTGCACCAA AGTGTGCCCG
ACCGGTGCGA TGCACAAACG GGAAGACGGT TTTGTGGTGG TGAATGAAGA GGTGTGCATT
GGATGCCGCT ATTGCCATAT GGCCTGCCCG TACGGCGCAC CACAATACAA TGCAGCCAAA
GGACACATGA CCAAGTGCGA TGGTTGCCAT GAACGGGTGG CGGAGGGCAA CAAGCCTATT
TGCGTGGAGT CCTGTCCGCT ACGGGCACTG GACTTTGGCC CAATCGAACA ATTACGGCAG
CAGCATGGCA CCCTGGCACA GATGGCTCCG CTGCCGGCGG CGCATTTTAC CCGGCCGAGC
ATAGTGCTGA AACCCAATGC CAATAGCCGG CCATGTGGCG ATACCACGGG CTATTTGGCC
AATCCGAAGG AGGTTTAA
 
Protein sequence
MTQQYGFFID SSRCTGCKTC ELACKDYKNL TPDVSFRRVY EYAGGDWQQD GEGWQQNVFA 
YYLSIACNHC EDPACTKVCP TGAMHKREDG FVVVNEEVCI GCRYCHMACP YGAPQYNAAK
GHMTKCDGCH ERVAEGNKPI CVESCPLRAL DFGPIEQLRQ QHGTLAQMAP LPAAHFTRPS
IVLKPNANSR PCGDTTGYLA NPKEV