| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1685 |
|---|
| Symbol | |
|---|
| ID | 5604212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1846207 |
|---|
| End bp | 1847550 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640937217 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_001477917 |
|---|
| Protein GI | 157369928 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.171868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAATA TGTCGCTCGA TTTTTCCCAG AATGAATTCC AGCCGTTGGC CGCGCGGATG
CGGCCGACCA CGCTGGCACA GTATATCGGC CAGCAACATC TGCTGGCCGC CGGCAAGCCT
TTGCCGCGTG CAATCGAGGC GGGGCAACTG CACTCGATGA TTCTGTGGGG GCCACCGGGC
ACCGGGAAAA CGACGCTGGC AGAATTGATC GGTCGTTATG GTCAGGCGGA CGTCGAGCGT
ATTTCTGCCG TCACGTCCGG GATCAAAGAG ATCCGCGAGG CGATTGAGCG TGCACGCCAA
AACCGTGACG CCGGTCGCCG CACTATCCTG TTTGTCGATG AGGTCCATCG CTTCAACAAA
AGCCAGCAGG ATGCCTTCCT GCCGCACATT GAAGACGGCA CCATCACCTT TATCGGCGCC
ACCACCGAAA ACCCGTCTTT TGAGCTTAAC TCGGCGCTGT TGTCACGAGC CCGTGTTTAT
TTGCTGAAGG CACTGACTGC CGAAGATATC AGCCAGGTGC TGGATCAGGC GATGCAGGAC
AGCAGCCGGG GCTTTGGCGG CCAGAATATC GAACTGCCGG AAGAGACGCG CCGCATGTTG
TCGGAGCTGG TTGGCGGCGA CGCTCGTCGG GCGCTGAACA GCCTGGAGAT GATGGCGGAC
ATGGCGGAGA TCAACGCCAA AGGCATTCGC GTGTTGACGC CGGAATTACT GAAAGAGGTC
TCTGGCGAAC GCAGTGCGCG TTTCGATAAT AAAGGCGACC GCTTTTACGA TCTGATCTCG
GCGCTGCATA AATCGGTGCG TGGTTCAGCG CCGGATGCTG CGTTGTACTG GTATGCACGT
ATTATTACCG CCGGGGGCGA TCCACTGTAT GTGGCGCGCC GGTTGCTGGC GATTGCTTCT
GAAGATGTGG GTAATGCCGA CCCGCGTGGC ATGCAGGTAG CCATCGCGGC CTGGGACTGC
TTTACCCGCG TCGGCCCGGC GGAAGGCGAA AGGGCTATTG CTCAGGCTAT CGTCTATTTG
GCCTGCGCGC CAAAAAGCAA CGCGGTTTAC ACGGCCTTCA AAGCGGCAAT ACGTGATGCC
AAAGAGATGG CTGATTATGA TGTACCCGAG CATCTGCGCA ATGCGCCAAC CAAGCTGATG
AAGGAAATGG GGCTGGGTGC AGAATATCGT TACGCTCACG ATGAGCCCAA TGCCTATGCC
GCCGGCGAGG ATTACTTCCC ACCCGAAATG GCCAGGACGC GTTACTATCA TCCAACCACG
CGCGGGCTGG AAGGTAAAAT TGGTGAAAAG CTGGCATGGC TGGCTGAGCA GGATCAAAAT
AGCCAGACAA AACGCTACCG CTAG
|
|---|
| Protein sequence | MSNMSLDFSQ NEFQPLAARM RPTTLAQYIG QQHLLAAGKP LPRAIEAGQL HSMILWGPPG
TGKTTLAELI GRYGQADVER ISAVTSGIKE IREAIERARQ NRDAGRRTIL FVDEVHRFNK
SQQDAFLPHI EDGTITFIGA TTENPSFELN SALLSRARVY LLKALTAEDI SQVLDQAMQD
SSRGFGGQNI ELPEETRRML SELVGGDARR ALNSLEMMAD MAEINAKGIR VLTPELLKEV
SGERSARFDN KGDRFYDLIS ALHKSVRGSA PDAALYWYAR IITAGGDPLY VARRLLAIAS
EDVGNADPRG MQVAIAAWDC FTRVGPAEGE RAIAQAIVYL ACAPKSNAVY TAFKAAIRDA
KEMADYDVPE HLRNAPTKLM KEMGLGAEYR YAHDEPNAYA AGEDYFPPEM ARTRYYHPTT
RGLEGKIGEK LAWLAEQDQN SQTKRYR
|
|---|
| |