| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1647 |
|---|
| Symbol | |
|---|
| ID | 5604083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1803441 |
|---|
| End bp | 1804406 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640937179 |
|---|
| Product | putrescine transporter subunit: membrane component of ABC superfamily |
|---|
| Protein accession | YP_001477879 |
|---|
| Protein GI | 157369890 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.16764 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATGC TTGCTGAACA CACACCGCCG GAACCACCGG CCAAAGGGCC CGGCCCGTTA
AAAGCCTTTT TCCAGCGCCT GCAGATGGCC CATGGCCGCA AGCTGGTGAT CGCGGTGCCG
CTGCTGTGGT TGACGCTGCT GTTCCTGCTG CCGTTCCTGA TCGTGTTCAA GATCAGCCTG
GCGGAACTGG CGTTGGCGGT CCCGCCCTAC ACTGACCTGA TGAGCTGGGC AGAGGGTAAG
CTGGACATCG CGCTCAATTT TGCCAACTAC CTGCAACTGA CCGACGATCC GCTGTATATA
GACGCTTATC TGCAATCGCT GCAGGTGGCG GCGGTATCGA CGGTTTGCTG TCTGATCATC
GGCTATCCGC TGGCCTGGGC GGTGGCGCAC AGCAAATCCT CAACCCGCAA TATTTTGCTG
TTGTTGGTGA TCCTGCCGTC GTGGACCTCG TTCCTGATCC GCGTTTACGC CTGGATGGGC
ATTCTGAAAA ATAACGGTAT CCTCAATAAC TTCTTGTTAT GGACCGGGGT GATCGATCAG
CCGTTGGTGA TCCTGCACAC CAATCTGGCG GTGTATATCG GCGTGGTGTA CTCCTACCTG
CCGTTTATGG TGCTGCCGAT TTATACCGCG CTGACGCGGT TGGACTATTC ATTGGTGGAG
GCGTCGCTGG ATCTGGGGGC TAAACCGTTG AAAACCTTTT TCAGCGTGAT TATGCCGCTG
ACCCGCGGCG GGATTATTGC CGGTTCTATG CTGGTGTTTA TCCCGGCGGT CGGCGAATTT
GTGATCCCGG AACTGCTGGG TGGGCCGGAC AGTATTATGA TCGGCAGGGT ACTGTGGCAG
GAGTTCTTTA ATAACCGTGA CTGGCCAGTA GCCTCGGCAG TGGCCACCGT CATGCTGCTG
CTGTTGATCG TACCGATTCT CTGGTTCCAC AAGCACCAGA ACAAGGAAAT AGGGGGGCAG
GGATGA
|
|---|
| Protein sequence | MTMLAEHTPP EPPAKGPGPL KAFFQRLQMA HGRKLVIAVP LLWLTLLFLL PFLIVFKISL
AELALAVPPY TDLMSWAEGK LDIALNFANY LQLTDDPLYI DAYLQSLQVA AVSTVCCLII
GYPLAWAVAH SKSSTRNILL LLVILPSWTS FLIRVYAWMG ILKNNGILNN FLLWTGVIDQ
PLVILHTNLA VYIGVVYSYL PFMVLPIYTA LTRLDYSLVE ASLDLGAKPL KTFFSVIMPL
TRGGIIAGSM LVFIPAVGEF VIPELLGGPD SIMIGRVLWQ EFFNNRDWPV ASAVATVMLL
LLIVPILWFH KHQNKEIGGQ G
|
|---|
| |