Gene Spro_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1643 
Symbol 
ID5604049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1799085 
End bp1799987 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID640937175 
Productalpha-L-glutamate ligase 
Protein accessionYP_001477875 
Protein GI157369886 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0124301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTG CCATTCTTTC GCGCGATGGA ACGTTGTACT CATGTAAACG CTTGGTGGAG 
GCGGCGGAAC AGCGCGGCCA CAGCATCGAG GTTATCGATC CACTCTCTTG CTATATGAAC
ATCAACCCGG CCGCGCCGAC TATCCACTAC CGCGGCCGCC AATTGGAGCG TTACGACGCG
GTGATCCCGC GCATCGGCTC CGCCATGACC TTTTATGGCA CTGCAGTGCT GCGCCAGTTT
GAACTGTTGG GCAGTTATCC GCTTAATGAG TCGGTGGCGA TCACTCGTGC GCGCGACAAG
CTGCGTTCGC TGCAGTTGCT GGCACGGCAG GGGATCGATT TGCCGATCAC CGGTTTTGCC
CATTCGCCCG ACGACACCGG CGATTTAATT GAACTGGTTG GCGGTGCGCC GCTGGTGGTC
AAACTGGTGG AAGGCACGCA GGGCATTGGC GTAGTACTGG CGGAAACTCG CCAGGCGGCA
GAAAGCGTGA TTGATGCCTT TCGTGGCCTG AACGCTCATA TTCTGGTGCA AGAATATATT
CGCGAGGCGC AGGGCAGTGA TGTGCGCTGC CTGGTGGTGG GGAGTAAGGT AGTCGCAGCC
ATTGAGCGCC AGGCCAAACC CGGGGAGTTT CGTTCCAATC TGCACCGGGG TGGCACCGCC
CGCAAGGTAA GCATCACTGC CAAAGAGCGG GCGATTGCGG TCAAGGCCGC CACCACACTG
GGGCTGGATG TCGCCGGGGT GGATATCCTG CGTGCGGCCC GTGGCCCGCT GGTGATGGAG
GTTAATGCTT CACCGGGGTT GGAAGGGGTG GAAAGTACCA CCGGGTTGGA TATCGCCGGC
AGGATGATCG AGTATATCGA GCAGCGCGGC AGGCCGGGTT TCAGGTTGAA ATCTGGCGGA
TAA
 
Protein sequence
MKIAILSRDG TLYSCKRLVE AAEQRGHSIE VIDPLSCYMN INPAAPTIHY RGRQLERYDA 
VIPRIGSAMT FYGTAVLRQF ELLGSYPLNE SVAITRARDK LRSLQLLARQ GIDLPITGFA
HSPDDTGDLI ELVGGAPLVV KLVEGTQGIG VVLAETRQAA ESVIDAFRGL NAHILVQEYI
REAQGSDVRC LVVGSKVVAA IERQAKPGEF RSNLHRGGTA RKVSITAKER AIAVKAATTL
GLDVAGVDIL RAARGPLVME VNASPGLEGV ESTTGLDIAG RMIEYIEQRG RPGFRLKSGG