Gene Spro_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1615 
SymbolhisD 
ID5603833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1769195 
End bp1770502 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content61% 
IMG OID640937147 
Producthistidinol dehydrogenase 
Protein accessionYP_001477847 
Protein GI157369858 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.217176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACT TCAATACTCT GGTCAACTGG GCAGACTGCA GCGCCGAACA GCGCACGGCA 
CTGCTGATGC GTCCGGCGAT CTCCGCCTCG GACAGCATCA GCCGCACGGT GAGCGAAATC
CTCGACAACG TGAAGGCCAA TGGCGATCAG GCGCTGCGCG AATACAGCGC TAAATTTGAT
AAAACCGAAG TTGGCGCACT GCGCGTCACC GCAGAGCAAA TAACGGCTGC CAGCGCGCGT
CTGGGCGATG AGATCAAGCA GGCAATGGCA ATTGCAGTCG CCAACGTGGA AACCTTCCAC
AATGCGCAAA AACTGCCGCC GGTTGATGTG GAAACCCAGC CGGGTGTGCG TTGTCAGCAG
GTAACCCGTC CGATCGACTC GGTTGGGCTA TATATTCCAG GCGGTTCTGC TCCGCTATTT
TCTACGGTGT TGATGCTGGC GACACCGGCA CGCATCGCCG GTTGCCGCCG CGTAGTGCTG
TGTTCACCGC CGCCGATTGC CGATGAGATA CTGTATGCCG CACAACTGTG TGGAGTGGAA
GAGGTGTTTC AGGTTGGCGG TGCGCAGGCG ATCGCCGCTA TGGCATTCGG TACCGACTCC
GTACCGCGCG TGGCAAAAAT CTTCGGGCCG GGCAATGCCT TTGTCACCGA AGCCAAACGC
CAGATCAGCC AACGACTGGA CGGTGCCGCC ATCGATATGC CGGCCGGCCC TTCCGAAGTG
CTGGTGATCG CCGACGCCGG TGCCACTCCG GCATTCGTCG CCTCGGATCT GCTGTCACAG
GCGGAGCACG GCCCGGACTC GCAGGTGATT TTGTTGACAC CGGAAGCCGC GATGGCGCAG
GCGGTACGCG ATGCCGTAGA ACAGCAACTG GCACAATTAC CCCGCGCCGA AACTGCACGT
CAGGCGCTGG CCAGTAGCCG ACTGATTGTC ACCAAAGATT TGGCCGAGTG CGTGGCCATC
AGCAATCAGT ATGGCCCGGA ACACCTGATC ATTCAGACCC GCGACGCCCG CGCTCTGGTC
GACAGCATCA CCAGCGCCGG TTCGGTGTTT CTTGGCGACT GGTCACCGGA GTCTGCCGGT
GACTATGCGT CCGGCACCAA CCACGTGCTG CCAACCTATG GTTACACCGC CACCTGCTCC
AGTTTGGGGC TGGCGGACTT CCAAAAACGC ATGACGGTAC AAGAGTTGAC GCCGCAGGGC
TTTATGAACC TGGCCGCCAC CATTGAAACC CTGGCCGCCG CCGAGCAGTT GATTGCCCAC
AAAAACGCCG TGACCCTGCG CGTTGCCGCC CTGAAGGAGC AAGCATGA
 
Protein sequence
MSNFNTLVNW ADCSAEQRTA LLMRPAISAS DSISRTVSEI LDNVKANGDQ ALREYSAKFD 
KTEVGALRVT AEQITAASAR LGDEIKQAMA IAVANVETFH NAQKLPPVDV ETQPGVRCQQ
VTRPIDSVGL YIPGGSAPLF STVLMLATPA RIAGCRRVVL CSPPPIADEI LYAAQLCGVE
EVFQVGGAQA IAAMAFGTDS VPRVAKIFGP GNAFVTEAKR QISQRLDGAA IDMPAGPSEV
LVIADAGATP AFVASDLLSQ AEHGPDSQVI LLTPEAAMAQ AVRDAVEQQL AQLPRAETAR
QALASSRLIV TKDLAECVAI SNQYGPEHLI IQTRDARALV DSITSAGSVF LGDWSPESAG
DYASGTNHVL PTYGYTATCS SLGLADFQKR MTVQELTPQG FMNLAATIET LAAAEQLIAH
KNAVTLRVAA LKEQA