| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1612 |
|---|
| Symbol | hisH |
|---|
| ID | 5603824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1766456 |
|---|
| End bp | 1767046 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640937144 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisH |
|---|
| Protein accession | YP_001477844 |
|---|
| Protein GI | 157369855 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.188315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTGG TGATTCTGGA CACCGGCTGC GCTAACCTGG CCTCCGTCAC CTACGCGGTG
CAGCGGTTGG GCTACCGCCC GGAAGTGAGC CGTGACCCGG AGATCGTACT GCGCGCCGAC
AAGCTTTTCC TGCCAGGCGT GGGTACCGCG CAGGCGGCGA TGGATCAACT GGAACAGCGC
GAACTGATTG AGTTGATCAA GGCCTGTACC CAACCGGTGC TGGGGATTTG CCTCGGCATG
CAGTTGCTGG CAAAAAGCAG CGAAGAGAAC GGCGGCATCG ACACGCTGGG CATTATCGAT
ACTCCGGTAA CCCAGATGAC CGACTTCGGC CTGCCGCTGC CGCACATGGG CTGGAATCAG
GTGTCTGCGC AGGCGGGTCA TCACCTGTTC CGCGGCATCG AAGACGGCGC CTACTTCTAC
TTCGTTCACA GCTATGCGAT GCCGATATGC CCAAGCACCA TCGCCCAGGC GAATTACGGC
GAGCCCTTCA CCGCCGCCGT GCAAAAAGAC AATTTCTTCG GCGTGCAGTT TCATCCAGAG
CGATCTGGCG CGGCCGGTGC GCAACTGTTG AAAAACTTTC TGGAGATGTA G
|
|---|
| Protein sequence | MDVVILDTGC ANLASVTYAV QRLGYRPEVS RDPEIVLRAD KLFLPGVGTA QAAMDQLEQR
ELIELIKACT QPVLGICLGM QLLAKSSEEN GGIDTLGIID TPVTQMTDFG LPLPHMGWNQ
VSAQAGHHLF RGIEDGAYFY FVHSYAMPIC PSTIAQANYG EPFTAAVQKD NFFGVQFHPE
RSGAAGAQLL KNFLEM
|
|---|
| |