Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1598 |
Symbol | |
ID | 5603742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1749485 |
End bp | 1750864 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640937130 |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_001477830 |
Protein GI | 157369841 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.538573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.487426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTCAAT TTAAACGACA GGTTGCTGGC CTTGCTATCA GTACCCTCTT GTTTGCGATA GCTGCGCCGG TTCATTCGAT AGGGATTATA GACGCATATT CGCTGGCACT TGAAAAAGAT CCGACCTTTA GGGCGGCTAT AAAAGAGAAA GAGGCGGGAG ACGAAAACGA AAACATCGGC AGGGCGGGGC TGCTGCCGAA GGTATCGCTT AATTACCAGA ACTCACCGAG AAACTGGCAA ACGCAAAAGT ACCCGGCGAG TGACATTTTT GGCAACAGTC TTGGTGAAAC CACCAAGCGG CAGCAGTACC GCAGTTATTC CAGCTCGGTA ACGCTGACGC AACCGCTGTT CGATTACGAG GCTTATGCAC GCTACAAGGC TGGCGTGGCG CAGACGCTGA TGTCTGATGA GCGCTACCGC AGCAAGTTTC TTGATTTGGC CGTACGGGTG ATCTCCGCCT ATGTGGAAGT GGCTTACTCG AAGGATCAAA TCGCTTTAGC TTCAGCTCAA AAGGCGGCCT ATAAAGAACA GTTGTCGCTG AACGATCGTT TAATGAGCGC GGGTGAGGGC ACCATTACCG ACGTTTCCGA GACTCAGGCG CGCTACAGCT TGGCAGAGGC GCAGGAAATT GAGGCGCGTG ATGCGCTGGA CGCGGCTCAG CGCGAGTTGG AAGTCATTAT TGGTATGCCG CTCAATCAGC TCGATGACGT ACAGCTGCTA CGCCCTGGCA AATTCCAGGT GGCGCCGTTA ATCCCATCAA AGTTTGAAGA GTGGCAAAAA ATTGCCCTCG AGAATAATCC GATGTTGGCG GCCTCTCGCC ACGGGGTTGA TGCGGCGAAA TATGAAGTGG AGAGAAATCG TGCTGGTTTT ATGCCGCAGG TGCAGCTCTA CGCCTCGCAT TCTGAGAATG ACTCCAGCAG CGATAATACG GTTAACCAAA AATATCGCAC TGACAGTATT GGTGTACAGG TGAGTATGCC GATCTACGCC GGCGGTGGGG TTTCGGCATC GACTCGCCAG GCTGCATCAC GATACGGGCA GGCGATGTAC GAAATGGATG CGCAGGTGGG CACTACGCTT AACGATCTGC GCAAACAGTA TAATTTGTGC ATTAGCAGCC GTGCCAAATT GGCGGCTTAC GAGCTGGCGG TGAAGTCGGC GACCACTCAG GTAACGGCAA CCCGGCAAAG CGTATTGGCG GGGCAACGTG TCAACGTCGA TGTACTTAAT GCTGAGCAAC AGTTGTACAG TGCCCAACGT GATCTGGCCT CGGCTAAGTA CACCTACATA AAATCCTGGA TTACGTTGCT GAGTGATTCG GGAACCCTTG ATGAAAGAGA TGTAAAACGC GTGGCGCAGT ACTTTTCCAT GAGCCGCTGA
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Protein sequence | MIQFKRQVAG LAISTLLFAI AAPVHSIGII DAYSLALEKD PTFRAAIKEK EAGDENENIG RAGLLPKVSL NYQNSPRNWQ TQKYPASDIF GNSLGETTKR QQYRSYSSSV TLTQPLFDYE AYARYKAGVA QTLMSDERYR SKFLDLAVRV ISAYVEVAYS KDQIALASAQ KAAYKEQLSL NDRLMSAGEG TITDVSETQA RYSLAEAQEI EARDALDAAQ RELEVIIGMP LNQLDDVQLL RPGKFQVAPL IPSKFEEWQK IALENNPMLA ASRHGVDAAK YEVERNRAGF MPQVQLYASH SENDSSSDNT VNQKYRTDSI GVQVSMPIYA GGGVSASTRQ AASRYGQAMY EMDAQVGTTL NDLRKQYNLC ISSRAKLAAY ELAVKSATTQ VTATRQSVLA GQRVNVDVLN AEQQLYSAQR DLASAKYTYI KSWITLLSDS GTLDERDVKR VAQYFSMSR
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