| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1597 |
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| Symbol | |
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| ID | 5603741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1748151 |
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| End bp | 1749482 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640937129 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001477829 |
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| Protein GI | 157369840 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.362914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.115374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACGC ACATTGGCGA GCCGCAAGAC TCGTATTCAG AACAGATCCC ACAGGATGAG
CGGCGTTTTA CCCGCATGGG GTGGTTAGTG GTTGGGATTG GCCTGTTTGG CTTCTTCGCC
TGGGCTGCGT TTGCACCTTT GGATAAAGGG GTCGCGTCAC CAGGTTCGGT GACCGTTTCC
GGCAATCGTA AAACCGTACA GGCCCCGGCC AGCGGCATCA TCAAAAGTAT CACGGTAAAA
GAAGGCGACA AGGTTAAAGC GGGCGAGGTG CTGGTGCAGT TGAGCCAGGT TCAGGCCCAG
GCACAGGTTG ACTCGCTTCG TGACCAATAT TACACCACGC TTGCCAGCGA AGGGCGTTTG
CTGGCTGAAC GTGATGGATT AAGCAAAGTC ACTTTTTCTC CTGTTTTTGA AACCATCCAG
GCTCAGCCGC GGGTCGCTGA GATCATCGCA TTGCAAACGC AGTTATTCTC TTCCCGTCGC
ATAGGGCTAC AAAGCGAAGT TGACGGCTAT AAACAGTCAA TGGACGGCAT GCGTTTCCAA
CTGAAGGGCC TGCAGGACTC AAGGGTCAAC AAGCAAATCC AGCTTTCCAG CCTGCGCGAA
CAGATGAACA GCATGAAGCA ACTGGCGGCG GACGGTTATT TACCGCGTAA CCGTTATCTG
GAGGTACAGC GTCAGTTTGC GGAAGTGAAC AGCAGTATCG ATGAAACCGT TGGGCGAATT
GGCCAGGTAC AAAAACAGTT GCAGGAGTCT CAGCAGCGGA TCGACCAACG CTTTGCCGAC
TATCAACGCG AAGTCAGAAC TCAGTTGGCG CAAACGCAGA TGGATGCCAG CGAGTTTAGA
AACAAGCTGG AAATGGCGAA TTTTGACCTC GGCAACACCG CTATCAGTTC GCCGGTGGAT
GGGACTGTCG TTGGGTTAAA TATCTTTACT CAGGGGGGCG TCGTGGGAGC GGGTGACCAC
CTGATGGACG TTGTACCCAG CCAGGCTACA TTGGTGGTGG ATTCACGCCT CAAGGTAGAG
CTGATTGATA AAGTGTACAA CGGGTTGCCG GTGGATTTGA TGTTTACCGC CTTCAACCAA
AACAAGACCC CGAAAATACC GGGGACGGTG ACGTTGGTTT CTGCCGACCG TCTGGTCGAC
AAGGCCAATG GCGAACCCTA CTACCAAATG CAGGTCACGG TTTCCCCCGA GGGCATGAAA
TTGCTCAGTG GCGAAGACAT CAAACCGGGG ATGCCTGTGG AGGTGTTTGT GAAGACCGGC
TCGCGCTCAC TGTTGAGTTA TCTGTTTAAA CCTATTTTGG ATCGCGCTCA TACTTCATTA
ACCGAGGAAT AA
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| Protein sequence | MSTHIGEPQD SYSEQIPQDE RRFTRMGWLV VGIGLFGFFA WAAFAPLDKG VASPGSVTVS
GNRKTVQAPA SGIIKSITVK EGDKVKAGEV LVQLSQVQAQ AQVDSLRDQY YTTLASEGRL
LAERDGLSKV TFSPVFETIQ AQPRVAEIIA LQTQLFSSRR IGLQSEVDGY KQSMDGMRFQ
LKGLQDSRVN KQIQLSSLRE QMNSMKQLAA DGYLPRNRYL EVQRQFAEVN SSIDETVGRI
GQVQKQLQES QQRIDQRFAD YQREVRTQLA QTQMDASEFR NKLEMANFDL GNTAISSPVD
GTVVGLNIFT QGGVVGAGDH LMDVVPSQAT LVVDSRLKVE LIDKVYNGLP VDLMFTAFNQ
NKTPKIPGTV TLVSADRLVD KANGEPYYQM QVTVSPEGMK LLSGEDIKPG MPVEVFVKTG
SRSLLSYLFK PILDRAHTSL TEE
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