| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1596 |
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| Symbol | |
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| ID | 5603680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1746330 |
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| End bp | 1748096 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640937128 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001477828 |
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| Protein GI | 157369839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.276203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.125682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCAAT TTATACCGCG TAATGAAATT GCGGATGTTA TACGGACACG CAGTAAAATC
TTCTGGACCG TTGGCATATT TACCGCATTT ATAAATTTAT TAATGTTAGT TCCCTCTGTC
TATATGTTGC AGGTCTACGA CAGGGTACTT CCTTCAGGTA ATGAAATCAC TTTGCTGATG
TTAACGCTGA TTATGCTGGG ATTGTTCGGC ATGATGGCGC TTCTTGAGTA TGTCCGTAGC
ATGGTTGTAA TCCGTATCGG CAGTCAGTTG GATATGCGAT TAAACACCCG TGTTTACACC
GCGGCTTATG AATCCAATCT GCAAAATGGC TCTTCCGACG CAGGGCAAAT GCTGGGTGAT
TTGACCACCG TACGGCAGTT TCTGACCGGT AGCGCATTGT TTGCGTTCTT CGATGCGCCC
TGGTTCCCGA TTTACCTGCT GGTGATTTTC CTGTTTAACC CGTGGTTGGG ATTATTCGCT
CTGGTTGGCT CACTGCTGCT GGTTGCGTTG GCGGTGGTCA ACGAGATGGT TTCCAAGAAA
CCTTTGGGAG AAGCCAGCAA GTTATCGATC ATGTCCAGCA GTTTGGCGAG TACCAATTTG
CGTAATGCCG AAGTGATCGA GGCATTGGGC ATGCTACCTA ATCTAAAGCG CCGCTGGTTC
GGTTTGCATC AGAGATTTCT GAATAGCCAA CGTGTCGCCA GCGAGCGTGC CACTACCGTT
ACCTCCATAA CCAAGTTTGT TCGTCTTTCG TTGCAATCCC TGGTGCTGGG ACTGGGTGGC
TGGTTGGCGA TAGATGGCCA TATTACCCCC GGCATGATGA TTGCTGGTTC TATCCTGATG
GGACGTACAC TGGCACCTAT CGAACAGGTG ATCAACGTTT GGAAGAGCTG GAGCTCTGCC
AAACTCTCCT ATCAGCGCCT GGTGAAATTA CTGGATAAAC ATCCGCCACG CGGTATGGGT
ATGTCTTTGC CGCGGCCGGA AGGGGTCATC TCTGTTGAAG GTGTTACTGC CACGCCTCCG
GGCTCCAAAG GCGATGCGGT ATTACATAAT GTCAGCTTCG CGATCCAGCC GGGTGACGTA
CTGGGGATTA TCGGGCCAAG CGCTTCCGGC AAGTCCACGT TGGCGCGTTT GTTGGTAGGT
ATCTGGCCGG TCAGCGAAGG TATTGTGCGG CTTGATAATG CCGACATTTA CCAATGGAAT
AAAGACGAAC TGGGGCCATT CATCGGTTAT CTGCCGCAGG ATATCGAACT GTTCGCCGGC
AGCATTGCCG AGAACATCGC TCGTTTTAAC GACATCGATT CTGAGAAAGT GATTGAAGCC
GCCAAGTTGG CCGGAGTCCA TGAGCTGATC CTGCGTTTTC CTAATGGCTA TGATTCGATC
ATTGGCAATG GCGGGGCGGG ATTATCCGGC GGACAGAAGC AGCGTATTGG CCTGGCCCGT
GCGCTGTATG GCGATCCTTC CCTGATCGTA TTGGATGAAC CCAATTCCAA TCTGGATGAT
GCCGGTGAAA AAGCGTTGAA TCAGGCGATC CTGTTCCTTA AACAGCGTAA TAAAACGGTG
ATCCTGATTA CCCATCGAAC CAACCTGTTG TCGATGACCA CCAAGCTGCT GCTGTTAGTG
AACGGTACCG TCAATGCGTT TGGCCCAACT CAGCAGGTGT TGCAAGCGTT GGCCAATGCG
CAGAAGGCGC AAACTCCACA GCAGGCGGTG CGCGCAGTCA ACTCCGAGCC GGACGAAGGC
AATATTCCAA AAACTCAAAT TAATTAA
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| Protein sequence | MNQFIPRNEI ADVIRTRSKI FWTVGIFTAF INLLMLVPSV YMLQVYDRVL PSGNEITLLM
LTLIMLGLFG MMALLEYVRS MVVIRIGSQL DMRLNTRVYT AAYESNLQNG SSDAGQMLGD
LTTVRQFLTG SALFAFFDAP WFPIYLLVIF LFNPWLGLFA LVGSLLLVAL AVVNEMVSKK
PLGEASKLSI MSSSLASTNL RNAEVIEALG MLPNLKRRWF GLHQRFLNSQ RVASERATTV
TSITKFVRLS LQSLVLGLGG WLAIDGHITP GMMIAGSILM GRTLAPIEQV INVWKSWSSA
KLSYQRLVKL LDKHPPRGMG MSLPRPEGVI SVEGVTATPP GSKGDAVLHN VSFAIQPGDV
LGIIGPSASG KSTLARLLVG IWPVSEGIVR LDNADIYQWN KDELGPFIGY LPQDIELFAG
SIAENIARFN DIDSEKVIEA AKLAGVHELI LRFPNGYDSI IGNGGAGLSG GQKQRIGLAR
ALYGDPSLIV LDEPNSNLDD AGEKALNQAI LFLKQRNKTV ILITHRTNLL SMTTKLLLLV
NGTVNAFGPT QQVLQALANA QKAQTPQQAV RAVNSEPDEG NIPKTQIN
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