Gene Spro_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1583 
Symbol 
ID5603123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1727572 
End bp1728708 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content42% 
IMG OID640937115 
Productpolysaccharide export protein 
Protein accessionYP_001477815 
Protein GI157369826 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.323182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.546592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA AACAATGGAA ACTGATACCG ATTTTGGTAT CGATTAGTGT GATCAGTGGT 
TGTACAATCA TCCCCGGTAC CCACCTTTCC ACTAGTGGTA AAGATATTGT AAAACAAGAA
GATAGCGATT TTGATATTGA TAAACTGGTA AACGTCTATC CAATGACACC AGGATTGATT
AGCAAAATGA GGCCAAAGCC TGCGATAGCG CAACCGAATA GTGCATTGGA ACGTGAATTG
CAGAATTATG AGTATCGCAT TGGTGTAGGT GACGTTTTAA TGGTGACCGT TTGGGATCAT
CCAGAATTAA CTACCCCAGC TGGTCAATAC CGTAGCGCCA GCGATACTGG TAACTGGGTG
AATTCTGATG GAACCATATT CTATCCTTAT ATCGGCAAGG TAAAAGTTGT TGGTAAAACT
GTTGTCCAAG TTAGAAATGA AATCTCATCG CGTTTATCTC ACTATATAGA AAGTCCTCAG
GTTGATGTGA GTATTGCAGC ATTCCGGTCA CAGAAAACGT ATATCACAGG AGAGGTTTCT
AAATCCGGTC AGCAAGCTAT TACCAACGTG CCGTTAACTG TGATGGATGC TATCAACGCC
GCAGGCGGTT TGGCAGAAAA TGCTGATTGG CGTAATGTTG TATTAACTCA TAATGGTAAA
GAGCAGCGTA TTTCTCTACA GGCGTTAATG CAAAAAGGCG ATTTGACACA AAACCATCTT
CTTTATCCAG GCGATATTCT TTACGTACCA CGTAATGATG ATTTGAAAGT GTTTGTCATG
GGTGAAGTTA AAACTCCTGC GACACTAAAA ATGGATAGAA GCGGGATGAC TTTGACTGAA
GCTTTGGGAA ATTCGGAAGG CATCAGCCAA TCCACCGCAG ATGCGACTGG TGTTTTTGTT
ATTCGCCCAT TACATGGTAC TGAAGGTAAC AAGCTTGCCA ATATTTACCA ATTAAACATG
GCAGATGCGA CTGCGATGGT TATGGGGGCT GAGTTCCATT TGCAGCCATA TGATATTGTG
TATGTGACGG CAGCTCCCGT TGCCCGCTGG AATCGTTTGA TCAGTCAGTT AGCTCCGACT
ATTTCTAGCT ATAATGATCT CAGTGAAGGT ACGTTACGAA TTCGTAATTG GCCGTAG
 
Protein sequence
MAKKQWKLIP ILVSISVISG CTIIPGTHLS TSGKDIVKQE DSDFDIDKLV NVYPMTPGLI 
SKMRPKPAIA QPNSALEREL QNYEYRIGVG DVLMVTVWDH PELTTPAGQY RSASDTGNWV
NSDGTIFYPY IGKVKVVGKT VVQVRNEISS RLSHYIESPQ VDVSIAAFRS QKTYITGEVS
KSGQQAITNV PLTVMDAINA AGGLAENADW RNVVLTHNGK EQRISLQALM QKGDLTQNHL
LYPGDILYVP RNDDLKVFVM GEVKTPATLK MDRSGMTLTE ALGNSEGISQ STADATGVFV
IRPLHGTEGN KLANIYQLNM ADATAMVMGA EFHLQPYDIV YVTAAPVARW NRLISQLAPT
ISSYNDLSEG TLRIRNWP