Gene Spro_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1571 
Symbol 
ID5602896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1712195 
End bp1713418 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content54% 
IMG OID640937103 
Productmajor facilitator transporter 
Protein accessionYP_001477803 
Protein GI157369814 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAT TCCCACCGCT GATCAACACA TTGCTGGCCA GCTCGCTGGT ATTGACCATT 
GGGCGTGGCG TCACGCTACC GTTCATTACC ATCTATCTCA CCGGGCATTT CCACCTGCTG
CCGAAAAGCG TCGGTATTAT TTTGGGCATC AGCCTGATGA TCGGTATTTT CGCCAGTCTG
TATGGCGGTT ACCTGGTCGA CAAGTTCAAC AAAAACACCT TGATCCTGAC GGCCATTTTG
CTGTTCGCCT TAAGTTTTTT CGCTATTCCG TGGATCCCGC GTCCGGGTGG GATCATCGTG
GTATTGGCTA TCCTGCATAC CGCCTATTCG GTACTGGGCA TCACCATCAA GGCCTGTTTT
GCCGACTGGC TACCGGTTGC ACAACGTATC AAAGCCTTTT CAATCAACTA CACGCTGGTG
AACGTTGGCT GGGCGGTGGG CTCATCACTG GGGGTGATGG TGGCAGGGCT GAACCCATTG
TTACCCTTCT ACCTTTCCGG CGGATTGGCT TTATGCACAG TGACGGCATT GAGTTTTAGC
CTGCACCGAC AACGCACTAC GCCGCCGGCA GCGACTGAGG CCGTGCCCTC TGCGCCGCCC
AATTTCCGCC AAACGCTGAC CATTCTGCGC AACGACCACC GGCTGATTTA TTTTACTCTC
GGCAGTACGC TTGGCGCGGT GGTTTTTGGC CAGTTCACCG GGTATTTATC GCAATACCTG
ATTCTGGTTT CCAACGCCGA GTTTGCCTAT CAGGTCATTG GGGCGGTGAT GATCGTTAAT
GCCTGCATCG TCATCGCGCT GCAGTATTTA CTGAGCCGGG GCATGCGGCA GGAAAACATG
CTGCGCTGGC TGGCGCTGGG CACCGTGTTT TTCATTCTGG GGCTGATCGG TTTTAGCCTG
GCCGGGCAAT CACTCTGGTT GTGGGCCATA GCTATGGCGA TATTTACCCT GGGGGAAATT
ATCGTGATCC CGGTGGAGTA TATGTTTATC GACTTTATCG CCCCACAGCA TCTGAAAGGC
AGCTACTACG GTGTGCAAAA CCTCAGCGCT TTGGGCGGTG CCATCAACCC GGTGCTGTGC
GGTTTTATCC TCAGCTATGC CGCACCGCAA ATGATGTTTG TGATGCTGAT TGCTGCCGCA
TTGTTCAGCC TGCTATTCTT TTTCCTCGGC CATCGCCTGG CACAAAAGCA GCAATACCGC
GCAGGCATCA TCAGTACAAA ATAA
 
Protein sequence
MKGFPPLINT LLASSLVLTI GRGVTLPFIT IYLTGHFHLL PKSVGIILGI SLMIGIFASL 
YGGYLVDKFN KNTLILTAIL LFALSFFAIP WIPRPGGIIV VLAILHTAYS VLGITIKACF
ADWLPVAQRI KAFSINYTLV NVGWAVGSSL GVMVAGLNPL LPFYLSGGLA LCTVTALSFS
LHRQRTTPPA ATEAVPSAPP NFRQTLTILR NDHRLIYFTL GSTLGAVVFG QFTGYLSQYL
ILVSNAEFAY QVIGAVMIVN ACIVIALQYL LSRGMRQENM LRWLALGTVF FILGLIGFSL
AGQSLWLWAI AMAIFTLGEI IVIPVEYMFI DFIAPQHLKG SYYGVQNLSA LGGAINPVLC
GFILSYAAPQ MMFVMLIAAA LFSLLFFFLG HRLAQKQQYR AGIISTK