Gene Spro_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1553 
Symbol 
ID5602587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1693294 
End bp1694202 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID640937085 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001477785 
Protein GI157369796 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGC ATTGGCGACG CAACGCCGCA ATGAAGGCGA TGCCGACGAT TAACCCTAAC 
GCGGTGCGCA CACCGTGGCA TGAGTTCTGG CGGCGGTTCC GCCAGCAACG TGTGGCGCTG
GTCGCCGGGC TGTTGGTGCT GTTGCTGGTG GTTGCCGCGT TATTGGCACC TTACCTGGTG
CCGTTTGATG CGGAAAACTA CTTTGATTAT GACCGCCTGA ACGAAGGCCC TTCGCTGGTG
CACTGGTTGG GGGTAGATTC CCTTGGGCGA GATATTTTCA GCCGCATTCT GATGGGCGCT
CGTATTTCGC TGGCCGCCGG GGTGTTCTCG GTGCTGGTCG GCGGGCTGAT CGGCACGCTG
CTGGGCCTGT TGGCCGGTTA TTATGAGGGC TGGTGGGACC GTATCACCAT GCGTATCTGT
GACGTGCTGT TTGCCTTTCC CGGTATTTTA TTGGCGATTG GCGTGGTAGC GATTATGGGC
AGCGGTATGT CCAACGTGAT CATTGCAGTG GCGATTTTCA GCATTCCGGC GTTTGCCCGG
CTGGTACGCG GCAATACGCT GGTATTGAAG CACCTGACCT ATATCGAGTC GGCGCGCAGC
ATCGGGGCTT CCGACTGGAC CATCATCCTG CGACATATAC TGCCGGGGAC GATTTCGTCG
ATTGTGGTGT ATTTTACCAT GCGTATCGGC ACCTCGATCA TTACCGCCGC CAGCCTGTCA
TTCCTCGGCC TGGGCGCGCA GCCACCAACG CCGGAGTGGG GTGCGATGCT CAATGAGGCT
CGGGCGGACA TGGTGATGGC ACCGCACGTG GCGATTTTCC CCAGTCTGGC AATATTCATC
ACCGTACTGG CGTTCAACCT GCTGGGTGAC GGGCTGCGCG ACGCGCTGGA TCCGAAATTA
AAAGGGTAG
 
Protein sequence
MIKHWRRNAA MKAMPTINPN AVRTPWHEFW RRFRQQRVAL VAGLLVLLLV VAALLAPYLV 
PFDAENYFDY DRLNEGPSLV HWLGVDSLGR DIFSRILMGA RISLAAGVFS VLVGGLIGTL
LGLLAGYYEG WWDRITMRIC DVLFAFPGIL LAIGVVAIMG SGMSNVIIAV AIFSIPAFAR
LVRGNTLVLK HLTYIESARS IGASDWTIIL RHILPGTISS IVVYFTMRIG TSIITAASLS
FLGLGAQPPT PEWGAMLNEA RADMVMAPHV AIFPSLAIFI TVLAFNLLGD GLRDALDPKL
KG