| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1550 |
|---|
| Symbol | |
|---|
| ID | 5604917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1688874 |
|---|
| End bp | 1690751 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640937082 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001477782 |
|---|
| Protein GI | 157369793 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG CCTTAATGCC GCTTGCGGCC GACGCCGGGC TATTATTGCC GCCGCAGCGC
GTGCTGTCGG TGCGCGATCT GAGCGTCCAA TTTCAACAAC AGGGCGAGAC CCTGGATGCG
GTGCGCAACC TGTCATTCGA TCTCGATCGC GGTGAAACGC TGGCGATCGT CGGTGAATCC
GGTTCGGGCA AGTCTGTCAC TTCTCTGGCA TTGATGCGGC TGGTCGAACA GGGCGGTGGC
AACATCGTCA GCGGCGTCAT GCCTTTTCGT CGGCGAAACG GCGAGGTGCT CGATTTGGCT
CGTGCCCATC AGGGTACGCT ACGCAGGGTG CGCGGTGCCG ATATGGCGAT GATCTTTCAG
GAGCCGATGA CCTCGCTGAA CCCGGTGTTT CCGGTGGGCG AGCAGATCGC CGAATCTCTG
CGCCTGCACC AGGCGATGGA CCATCGGGCG GCCAAACAGG CCGCTTTGCA GATGCTTGAT
CTGGTGCGCA TTCCCGAAGC CAAAGACGTG CTTAACCGCT ATCCGCACCA GCTGTCTGGC
GGTATGCGTC AGCGAGTGAT GATCGCCATG GCACTGTCTT GCAAGCCGGC GCTATTGATT
GCCGACGAAC CTACAACCGC ATTGGACGTC ACCATTCAGG CGCAGATCCT GCAGCTCATC
CGCGTGCTGC AGCAGGAAAT GCAGATGGGG GTGATTTTCA TCACCCACGA CATGGGCGTG
GTGGCAGAAA TTGCCGACCG GGTATTGGTG ATGCGTCAGG GGGAACGGGT GGAGCAGGGG
CCGGTGCGCG AGCTGTTTGC CGCCCCGCAA CAGCCCTATA CCCAGGCACT GCTGGCCGCG
GTACCAAAAC TCGGTTCGAT GGCGACCCAG GACTTTCCGG CCAAATTCCC GCTGCCGAAC
GGTGCGGGCA ATGGCGGGCC GCAGGATACC GTCCCGCCCG GTGCGGCACC GATCCTGCGG
GTGGAGAATT TGGTGACGCG CTTTGATCTG CGTAGCGGCA TCCTCAACCG GGTTACCCGC
CGGGTGCACG CGGTGGAAAA CGTCAGTTTT GACCTCTACC CCGGCGAAAC TTTGGGGCTG
GTGGGGGAAT CCGGCTGCGG CAAGTCCACC ACTGGTCGTT CCTTGCTGAA GCTGGTGGAT
AGCCAGCGCG GCACCATTAC CTTTGACGGC CGCCAGATTA ATCAGTTGAA AGGCCCGGCG
TTGCAGCACC TGCGGCGGGA TATTCAGTTT ATCTTTCAGG ATCCTTACGC TTCGCTCGAC
CCGCGTCTGA CCGTCGGCTT TTCGATTATG GAGCCCTTGC TGGTGCATAA CGTGGCGCGC
GGCAAGGCGG CGCAAGAGCG GGTCGATTGG CTGCTGGAAC GCGTCGGGCT GAAACCCGAA
CACGCACGTC GTTACCCGCA TGAGTTTTCA GGTGGTCAGC GGCAGCGTAT CTGCATTGCG
CGCGCCCTGG CACTCAACCC TAAAGTGGTG ATCGCCGACG AATCGGTGTC GGCGCTCGAC
GTGTCGATTC AGGCGCAAAT CGTCAATCTG CTGCTCGATT TACAGCGGGA GCTTGGCATT
GCCTTTCTGT TTATTTCCCA TGATATGGCG GTGGTGGAGC GCATCAGTCA TCGCGTTGCG
GTGATGTACC TCGGGCAGAT TGTCGAAATT GGTCCGCGCC GCGCCGTGTT TGATAACCCG
CAGCATGCCT ACACCCGCAA GCTGATGGCG GCCGTGCCGG TGGCCGATCC GGCCCATGCG
CATAAACGCC AGCCGCTGCT GGTCGATGAA ATTCCCAGCC CGATCCGTGC GCTGGGCGAT
GAACCCGTTA CCGCACCGCT GGTGCAGGTT GGCCCCGGGC ACTTTGTTGC CCGTCATCCG
ATCGCCGGTG CCTTTTAA
|
|---|
| Protein sequence | MTDALMPLAA DAGLLLPPQR VLSVRDLSVQ FQQQGETLDA VRNLSFDLDR GETLAIVGES
GSGKSVTSLA LMRLVEQGGG NIVSGVMPFR RRNGEVLDLA RAHQGTLRRV RGADMAMIFQ
EPMTSLNPVF PVGEQIAESL RLHQAMDHRA AKQAALQMLD LVRIPEAKDV LNRYPHQLSG
GMRQRVMIAM ALSCKPALLI ADEPTTALDV TIQAQILQLI RVLQQEMQMG VIFITHDMGV
VAEIADRVLV MRQGERVEQG PVRELFAAPQ QPYTQALLAA VPKLGSMATQ DFPAKFPLPN
GAGNGGPQDT VPPGAAPILR VENLVTRFDL RSGILNRVTR RVHAVENVSF DLYPGETLGL
VGESGCGKST TGRSLLKLVD SQRGTITFDG RQINQLKGPA LQHLRRDIQF IFQDPYASLD
PRLTVGFSIM EPLLVHNVAR GKAAQERVDW LLERVGLKPE HARRYPHEFS GGQRQRICIA
RALALNPKVV IADESVSALD VSIQAQIVNL LLDLQRELGI AFLFISHDMA VVERISHRVA
VMYLGQIVEI GPRRAVFDNP QHAYTRKLMA AVPVADPAHA HKRQPLLVDE IPSPIRALGD
EPVTAPLVQV GPGHFVARHP IAGAF
|
|---|
| |