| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1545 |
|---|
| Symbol | |
|---|
| ID | 5603178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1683245 |
|---|
| End bp | 1684813 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640937077 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001477777 |
|---|
| Protein GI | 157369788 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTTG GCAGTAAGCC GCTGTTTGAA AACATCTCTG TAAAATTTGG TGGCGGTAAC
CGCTATGGTT TGATCGGGGC CAACGGCTGC GGCAAATCCA CCTTTATGAA AATCCTGGGC
GGCGATCTGG TACCGAGCGG CGGCAACGTG TTCCTCGATC CGAACGAGCG TCTGGGTAAA
CTGCGTCAGG ATCAGTTCGC TTTTGAGCAA TACAGCGTGC TGGACACCGT TATCATGGGC
CACCATGAAC TGTGGGCAGT GAAAGAAGAG CGTGACCGTA TTTACGCTAT GGCCGAAATG
AGCGAAGAAG ACGGCTATAA AGTGGCCGAT CTGGAAGTGG CTTACGGCGA AATGGACGGT
TACACCGCCG AAGCGCGTGC CGGCGAGCTG CTGCTCGGTG TTGGCATCCC GGTCGAACAG
CATTATGGCC CGATGAGCGA AATCGCGCCG GGCTTTAAGC TGCGTGTGTT GCTGGCGCAG
GCCCTGTTCT CCGATCCGGA AATCCTGCTG CTCGACGAAC CGACCAACAA CCTGGACATC
GATACCATTC GCTGGCTGGA GCAGGTGCTT AACGAGCGTA ACAGCACCAT GGTTATCATT
TCGCACGACC GTCACTTCCT GAACATGGTG TGTACTCACA TGGCGGATCT GGACTACGGC
GAACTGCGCG TGTATCCGGG CAACTATGAC GAATACATGA CGGCGGCCAC GCAATCGCGT
GAACGTCTGA TGGCGGATAA CGCCAAGAAG AAGGCACAGA TTAACGAACT GCAGTCGTTC
GTCAGCCGCT TCAGCGCCAA CGCCTCCAAA TCCAAACAGG CCACTTCACG CGCCCGCCAG
ATAGACAAAA TCCAGCTGGA AGAAGTGAAG GCTTCAAGCC GTCAGAACCC GTTCATCCGT
TTCGATCAGG ACAAAAAACT GTTCCGTAAC GCGCTGGAAG TGGAAGCGCT GACCAAAGGT
TTCGACAACG GTCCACTGTT CAGCAAGCTC AACCTGATGG TTGAAGTGGG CGAGAAAGTG
GCGGTGCTGG GTCCGAACGG TGTCGGTAAG TCTACCTTGC TGAAAACCCT GGTTGGCGAT
GCACAGCCGG ACAGCGGCAG CGTGAAATGG TCTGAAAACG CCAAGATCGG TTACTACGCG
CAGGATCACG AATACGAGTT CGATGACACC CTGACGGTAT TCGACTGGAT GAGCCAGTGG
AAGCAGGAAA AGGACGACGA GCAGGCCGTT CGCAGCGTGC TGGGGCGTTT GCTGTTCAGC
CAGGACGACA TCAAGAAGAA AGTTAAGGTG CTGTCTGGTG GTGAAAAGGG CCGTATGCTG
TTCGGCAAGC TGATGATGCA GCGCCCTAAC ATCCTGATTA TGGATGAACC GACTAACCAC
CTGGATATGG AATCCATCGA GTCGCTGAAC ATGGCGTTGG AAATGTACGA AGGCACCCTG
ATCTTCGTTT CCCACGACCG TGAGTTCGTT AGCTCGCTGG CGACCCGCGT ACTGGAAATG
ACACCGACCA AGGTTATCGA CTTTACCGGC AACTACGAAG ACTATCTGCG TAGCCAGGGT
ATCGTGTAA
|
|---|
| Protein sequence | MQFGSKPLFE NISVKFGGGN RYGLIGANGC GKSTFMKILG GDLVPSGGNV FLDPNERLGK
LRQDQFAFEQ YSVLDTVIMG HHELWAVKEE RDRIYAMAEM SEEDGYKVAD LEVAYGEMDG
YTAEARAGEL LLGVGIPVEQ HYGPMSEIAP GFKLRVLLAQ ALFSDPEILL LDEPTNNLDI
DTIRWLEQVL NERNSTMVII SHDRHFLNMV CTHMADLDYG ELRVYPGNYD EYMTAATQSR
ERLMADNAKK KAQINELQSF VSRFSANASK SKQATSRARQ IDKIQLEEVK ASSRQNPFIR
FDQDKKLFRN ALEVEALTKG FDNGPLFSKL NLMVEVGEKV AVLGPNGVGK STLLKTLVGD
AQPDSGSVKW SENAKIGYYA QDHEYEFDDT LTVFDWMSQW KQEKDDEQAV RSVLGRLLFS
QDDIKKKVKV LSGGEKGRML FGKLMMQRPN ILIMDEPTNH LDMESIESLN MALEMYEGTL
IFVSHDREFV SSLATRVLEM TPTKVIDFTG NYEDYLRSQG IV
|
|---|
| |