Gene Spro_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1516 
Symbol 
ID5607439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1652875 
End bp1654497 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content56% 
IMG OID640937048 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_001477748 
Protein GI157369759 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.852004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGT CCTTATTCAG CCGTTATACC TGCTTTGTGT TGAGTCTCTT GTTGACGCTG 
ACATCATTGG TACTGTTGTC GCACCACCCC TGGTTTTGGC TGCTGGCGAT CATTTTTGGC
GGGCTGAGCG CACTGGGGAT TTACGATTTG ACCCAGCAGC GCCACGCCAT CTGCCGCAAC
TACCCCATCA TCGGCCGCCT GCGCTTCTTC TTCGAATTTA TCCGCCCGGA AATACGCCAG
TATTTATTGG AAGAAGATAA CGCTCAGATC CCGTTTTCCC GTACTCAACG CACGCTGGTC
TATCGCCGCG CCAAAAACGA GATGGGTGAC AAACCCTTCG GCACTCAGTT GGACGTCTAT
CAAACCGGCT ATGAATGCAT CGGCCATTCC ATGTGTCCGG TAGCGGTATC CGAACCGACC
AGCTTCCGCG TGGCGATCGG CGGCCCCGGC TGCAGCCAGC CCTACTCCGC CTCTATCTTT
AATATCTCCG CCATGAGTTT CGGCGCGCTG TCGGCCAATG CCATTCGTGC CCTCAATCTG
GGCGCGGCCA AGGGCAATTT TTATCATGAC ACCGGTGAGG GCAGCATCAG CCGCTATCAT
CGTGAGAACG GCGGCGATCT GGTGTGGGAA CTGGGAAGCG GCTATTTTGG TTGCCGCACC
AGCGATGGCC ATTTTGATCC GCAGCGCTTT GCCGAGCAGG CTAAAAACCC GCAGGTCAAA
ATGATTGAAA TCAAACTCAG TCAGGGCGCC AAGCCGGGCC ATGGCGGCAT TCTGCCGGCG
AAAAAAGTGG ATGCGGAAAT TGCCGCGACG CGCGGTGTAC CAGAAGGGAT CGACTGTATT
TCGCCGGCCT CACACAGTGC CTTTAGCACC CCGGTGGAAA TGATGCACTT CATCCAGCAG
TTGCGCGAGC TGTCTGGTGG CAAACCCGTG GGCTTCAAGC TATGTATCGG CCACCCCTGG
GAGTTTGTCG CCATCGCCAA GGCCATGTTG CAGACCCAAA TATTGCCGGA CTTTATCGTG
GTGGACGGCA AAGAAGGCGG CACCGGGGCG GCACCGCTGG AGTTGTCCAA CTATATGGGC
ATGCCACTGC GCGAAGGGCT GTTGTTCGTA CATAACACTC TGGTTGGCTG TGGATTGCGT
GACCAAATCA AAATAGGTGC CAGCGGCAAG ATTATCAGCG CCTTCGACAT CGCCAGCGTA
TTGGTACTGG GTGCCGACTG GGTGAATTCA GCGCGCGGCT TTATGTTCGC CGTAGGCTGC
ATTCAATCGC AGAGTTGTCA CACCAACCAC TGCCCGACCG GCGTCGCCAC CCAGGATCCG
CTGCGACAGA AAGCGCTGGT GGTGCCAAAC AAGGCGGAGC GCGTCTACCA TTTTCACCAG
AACACGGTGA AAGCGCTGGC GGAAATGTTG GCGGCGGCCG GGGTCAGCCG CCCGGAACAG
CTGACTTCAC ACCATATGCT GCGCCGCATT ACCTCAACGG AAATAAAGGT CTATGCCGAC
ATCTATTACT ACCTGAAACC TGGGGCGCTG TTGCAAAAAG AGATTGAAAG CGATTTCTAT
GCGCGCATGT GGCGTATGGC GACACCAAAC AGTTTCGATC AGGCGATCGC CCTGCCGGTT
TAA
 
Protein sequence
MKSSLFSRYT CFVLSLLLTL TSLVLLSHHP WFWLLAIIFG GLSALGIYDL TQQRHAICRN 
YPIIGRLRFF FEFIRPEIRQ YLLEEDNAQI PFSRTQRTLV YRRAKNEMGD KPFGTQLDVY
QTGYECIGHS MCPVAVSEPT SFRVAIGGPG CSQPYSASIF NISAMSFGAL SANAIRALNL
GAAKGNFYHD TGEGSISRYH RENGGDLVWE LGSGYFGCRT SDGHFDPQRF AEQAKNPQVK
MIEIKLSQGA KPGHGGILPA KKVDAEIAAT RGVPEGIDCI SPASHSAFST PVEMMHFIQQ
LRELSGGKPV GFKLCIGHPW EFVAIAKAML QTQILPDFIV VDGKEGGTGA APLELSNYMG
MPLREGLLFV HNTLVGCGLR DQIKIGASGK IISAFDIASV LVLGADWVNS ARGFMFAVGC
IQSQSCHTNH CPTGVATQDP LRQKALVVPN KAERVYHFHQ NTVKALAEML AAAGVSRPEQ
LTSHHMLRRI TSTEIKVYAD IYYYLKPGAL LQKEIESDFY ARMWRMATPN SFDQAIALPV