| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1515 |
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| Symbol | |
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| ID | 5603625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1651113 |
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| End bp | 1652780 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640937047 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001477747 |
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| Protein GI | 157369758 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.307618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACG ATTACATCAT TATCGGGGCC GGCTCGGCCG GTAACGTATT AGCCACCCGC
TTAACCGAAG ACGCTGACGT CAGCGTGCTG CTGCTGGAAG CCGGCGGCCC GGACTATCGG
ATGGATTTTC GCACTCAGAT GCCGGCGGCG TTGGCTTTCC CGCTGCAGGG GCGCCGTTAC
AACTGGGCCT ATGAAACCGA CCCTGAGCCG CACATGAACA ATCGCCGCAT GGAATGTGGC
CGTGGTAAGG GACTGGGCGG TTCATCGCTG ATAAACGGCA TGTGCTACAT CCGCGGCAAC
GCGATGGATT TCGATAACTG GGCGAAGGCA CCGGGTCTGG AAGACTGGAG CTACCTGGAT
TGTCTGCCGT ATTTCCGCAA GGCGGAAACC CGCGATATCG GGCCGAACGA TTTTCACGGC
GGTGATGGCC CGGTCAGCGT TACCACGCCG AAAGCCGGTA ACAACGAATT ATTCCACGCG
ATGGTGGAGG CTGGTGTTCA GGCAGGCTAC CCGCGTACCG AGGATCTGAA CGGCTACCAG
CAGGAAGGCT TCGGCCCGAT GGATCGCACC GTAACGCCGA AAGGTCGTCG TGCCAGCACC
GCTCGCGGTT ATCTGGATCA GGCGCGTTCT CGCCCTAATT TGAAGATTGT GACCCACGCG
CTGACCGATC GCATCCGCTT CGACGGCAAG CGGGCGGTGG GCGTTGACTA CTTGCAGGGT
GAAGCAAAGG ATGTCACCAG TGCCCGTGCG CGTCGGGAAG TGCTGCTGTG CGCCGGGGCG
ATCGCCTCGC CACAGATCCT GCAGCGCTCC GGCGTGGGAC CGGCCGCCTT GCTGAACCGT
CTGGATATTG ATCTGGTACA CGAACTGCCG GGTGTGGGTG AAAACCTGCA AGACCATCTG
GAAATGTACC TGCAGTACGC CTGTAAAAAA CCGGTGTCGC TGTACCCGGC GTTGCAATGG
TTTAACCAGC CTAAAATCGG TGCGGAATGG CTATTCAATG GCAGCGGTAT TGGTGCCAGT
AACCAATTTG AAGCCGGTGG TTTTATCCGC AGCCGTGAAG AGTTTGCCTG GCCGAACATT
CAGTATCATT TCCTGCCGGT AGCAATTAAC TACAACGGCA GTAATGCGGT GAAAGAGCAC
GGTTTCCAGG CACACGTCGG TTCGATGCGC TCCCCGAGCC GTGGCCGGGT GCAGGTCAAA
TCCAAAGATC CGCGCCAGCA CCCGAGCATC TTGTTCAACT ATATGGCGAC CGAGCAGGAC
TGGCAGGAGT TCCGCGATGC CATCCGCATC ACGCGTGAAA TCATGGCGCA ACCGGCGTTG
GATGAATACC GTGGTCGTGA GATAAGCCCA GGGCCGGAAG TGCAGACCGA CGAGCAGTTG
GACGCTTTTG TTCGTGAACA TGCCGAAACC GCCTTCCATC CTTCCTGCTC ATGCAAAATG
GGTGAAGACG AAATGGCGGT GGTGGATGGT CAGGGCCGGG TGCACGGCCT GGAAGGGCTG
CGGGTGGTGG ATGCGTCAAT TATGCCGTTG ATCATTACCG GTAATCTGAA TGCCACCACT
ATCATGATCG CCGAGAAAAT CGCCGACCGC ATCCGCCAAC GCACGCCGCT GCCGCGCAGC
ACCGCAGAAT ACTACGTGGC CGGTAACGCC CCGGCGCGTA AACAGTAA
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| Protein sequence | MEYDYIIIGA GSAGNVLATR LTEDADVSVL LLEAGGPDYR MDFRTQMPAA LAFPLQGRRY
NWAYETDPEP HMNNRRMECG RGKGLGGSSL INGMCYIRGN AMDFDNWAKA PGLEDWSYLD
CLPYFRKAET RDIGPNDFHG GDGPVSVTTP KAGNNELFHA MVEAGVQAGY PRTEDLNGYQ
QEGFGPMDRT VTPKGRRAST ARGYLDQARS RPNLKIVTHA LTDRIRFDGK RAVGVDYLQG
EAKDVTSARA RREVLLCAGA IASPQILQRS GVGPAALLNR LDIDLVHELP GVGENLQDHL
EMYLQYACKK PVSLYPALQW FNQPKIGAEW LFNGSGIGAS NQFEAGGFIR SREEFAWPNI
QYHFLPVAIN YNGSNAVKEH GFQAHVGSMR SPSRGRVQVK SKDPRQHPSI LFNYMATEQD
WQEFRDAIRI TREIMAQPAL DEYRGREISP GPEVQTDEQL DAFVREHAET AFHPSCSCKM
GEDEMAVVDG QGRVHGLEGL RVVDASIMPL IITGNLNATT IMIAEKIADR IRQRTPLPRS
TAEYYVAGNA PARKQ
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