Gene Spro_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1491 
Symbol 
ID5606965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1625218 
End bp1626480 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content62% 
IMG OID640937023 
Producttype III effector Hrp-dependent outers 
Protein accessionYP_001477723 
Protein GI157369734 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCG GCGTCATTGC AGATGATTTT ACCGGAGCCA CCGATATTGC CAGCTTTCTG 
GTAGAAAACG GCCTGCCGAC GGTGCAGTTG AACGGCGTGC CGCGGGATGA CCTGCCGGTC
GAAGCGCAGG CGGTGGTTAT CAGCCTGAAG TCACGCTCCT GCCCGGTGGC GCAGGCCATT
GAGCAGTCGT TGCAGGCGTT GGCCTGGCTA CAGCGCCAGG GTTGCCGGCA ATTTTACTTC
AAATATTGTT CGACCTTCGA CAGCACCGCG CAGGGCAATA TCGGCCCGGT GACCGACGCC
CTGCTTGATG CGTTGGGCGA AAGCCAGACG GTGATTTCAC CCGCGTTGCC AGTTAACGGC
CGCACCGTAT ATCAGGGCTA TCTGTTCGTG TCGGATCAGT TGCTGGCAGA GTCCGGCATG
CGCCACCATC CGGTAACGCC AATGACCGAC AGTAACCTGC TGCGGCTGAT GGAAGCACAG
GCTCAGGGAC GCTGTGGGCT GGTGAACGCC GCAGAAATGG ATCGCGGTGC CGGGGCGGTG
GCTGAAAAAC TACGGCAATT GGCACTGCAG GGCATGCGTT ACGCCGTGCT CGATACGCTG
AATGAACAGC ACTTGCTGAC CCAGGGTGCG GCGCTGAAAG ATATGAAGCT GGTGACCGGT
GGCTCCGGCC TGGCGATTGG CCTGGCACGC CAATGGGCGC AACCGGGGCA AGGCAGCCCA
CAGGCCGCAG GAGCGCCGCA AGGAGCAAAA GCCGTGGTGT TGTCCGGTTC CTGTTCCACT
ATGACTAATC AACAGGTGGC ACGTTACCGT CAACAGGCGG CCGCTATGGC GGTCGACGTG
GCGCGGTGCC TGAATGATGC CGAGCGCACG GCCTATATCA CCGAGCTGGC CGACTGGGTG
CAACAGCAGG CGAGTGCCCC GCTGGCCCCT CTGCTGTACG CCACCGCAGA GCCGGAAAAA
CTGCAGCAGG TGCAACAGCA GTACGGTATG GCCGCCGCCA GCCAGGCGGT AGAGTCGCTG
TTCGCCGGGG TGGTCAAACA GCTCCAGCAG CGGGGTTTCA GCCGCTTTAT CGTCGCCGGT
GGCGAAACCT CTGGCGTGGT AACGCAGGCT CTGGGGATTC GCGGTTTCCA CATTGGCCCC
TGTATTTCTC CCGGCGTGCC CTGGGTGCGT GCCATCGATC AGTCTATTTC ACTGGCCCTG
AAATCGGGCA ATTTTGGTGA CGAGAACTTT TTCGCCCGGG CGCAAACGGA GTTCCCCCTA
TGA
 
Protein sequence
MLLGVIADDF TGATDIASFL VENGLPTVQL NGVPRDDLPV EAQAVVISLK SRSCPVAQAI 
EQSLQALAWL QRQGCRQFYF KYCSTFDSTA QGNIGPVTDA LLDALGESQT VISPALPVNG
RTVYQGYLFV SDQLLAESGM RHHPVTPMTD SNLLRLMEAQ AQGRCGLVNA AEMDRGAGAV
AEKLRQLALQ GMRYAVLDTL NEQHLLTQGA ALKDMKLVTG GSGLAIGLAR QWAQPGQGSP
QAAGAPQGAK AVVLSGSCST MTNQQVARYR QQAAAMAVDV ARCLNDAERT AYITELADWV
QQQASAPLAP LLYATAEPEK LQQVQQQYGM AAASQAVESL FAGVVKQLQQ RGFSRFIVAG
GETSGVVTQA LGIRGFHIGP CISPGVPWVR AIDQSISLAL KSGNFGDENF FARAQTEFPL