Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1491 |
Symbol | |
ID | 5606965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1625218 |
End bp | 1626480 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640937023 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_001477723 |
Protein GI | 157369734 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCG GCGTCATTGC AGATGATTTT ACCGGAGCCA CCGATATTGC CAGCTTTCTG GTAGAAAACG GCCTGCCGAC GGTGCAGTTG AACGGCGTGC CGCGGGATGA CCTGCCGGTC GAAGCGCAGG CGGTGGTTAT CAGCCTGAAG TCACGCTCCT GCCCGGTGGC GCAGGCCATT GAGCAGTCGT TGCAGGCGTT GGCCTGGCTA CAGCGCCAGG GTTGCCGGCA ATTTTACTTC AAATATTGTT CGACCTTCGA CAGCACCGCG CAGGGCAATA TCGGCCCGGT GACCGACGCC CTGCTTGATG CGTTGGGCGA AAGCCAGACG GTGATTTCAC CCGCGTTGCC AGTTAACGGC CGCACCGTAT ATCAGGGCTA TCTGTTCGTG TCGGATCAGT TGCTGGCAGA GTCCGGCATG CGCCACCATC CGGTAACGCC AATGACCGAC AGTAACCTGC TGCGGCTGAT GGAAGCACAG GCTCAGGGAC GCTGTGGGCT GGTGAACGCC GCAGAAATGG ATCGCGGTGC CGGGGCGGTG GCTGAAAAAC TACGGCAATT GGCACTGCAG GGCATGCGTT ACGCCGTGCT CGATACGCTG AATGAACAGC ACTTGCTGAC CCAGGGTGCG GCGCTGAAAG ATATGAAGCT GGTGACCGGT GGCTCCGGCC TGGCGATTGG CCTGGCACGC CAATGGGCGC AACCGGGGCA AGGCAGCCCA CAGGCCGCAG GAGCGCCGCA AGGAGCAAAA GCCGTGGTGT TGTCCGGTTC CTGTTCCACT ATGACTAATC AACAGGTGGC ACGTTACCGT CAACAGGCGG CCGCTATGGC GGTCGACGTG GCGCGGTGCC TGAATGATGC CGAGCGCACG GCCTATATCA CCGAGCTGGC CGACTGGGTG CAACAGCAGG CGAGTGCCCC GCTGGCCCCT CTGCTGTACG CCACCGCAGA GCCGGAAAAA CTGCAGCAGG TGCAACAGCA GTACGGTATG GCCGCCGCCA GCCAGGCGGT AGAGTCGCTG TTCGCCGGGG TGGTCAAACA GCTCCAGCAG CGGGGTTTCA GCCGCTTTAT CGTCGCCGGT GGCGAAACCT CTGGCGTGGT AACGCAGGCT CTGGGGATTC GCGGTTTCCA CATTGGCCCC TGTATTTCTC CCGGCGTGCC CTGGGTGCGT GCCATCGATC AGTCTATTTC ACTGGCCCTG AAATCGGGCA ATTTTGGTGA CGAGAACTTT TTCGCCCGGG CGCAAACGGA GTTCCCCCTA TGA
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Protein sequence | MLLGVIADDF TGATDIASFL VENGLPTVQL NGVPRDDLPV EAQAVVISLK SRSCPVAQAI EQSLQALAWL QRQGCRQFYF KYCSTFDSTA QGNIGPVTDA LLDALGESQT VISPALPVNG RTVYQGYLFV SDQLLAESGM RHHPVTPMTD SNLLRLMEAQ AQGRCGLVNA AEMDRGAGAV AEKLRQLALQ GMRYAVLDTL NEQHLLTQGA ALKDMKLVTG GSGLAIGLAR QWAQPGQGSP QAAGAPQGAK AVVLSGSCST MTNQQVARYR QQAAAMAVDV ARCLNDAERT AYITELADWV QQQASAPLAP LLYATAEPEK LQQVQQQYGM AAASQAVESL FAGVVKQLQQ RGFSRFIVAG GETSGVVTQA LGIRGFHIGP CISPGVPWVR AIDQSISLAL KSGNFGDENF FARAQTEFPL
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