Gene Spro_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1479 
SymbolglnH 
ID5607366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1614883 
End bp1615626 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content52% 
IMG OID640937011 
Productglutamine ABC transporter periplasmic protein 
Protein accessionYP_001477711 
Protein GI157369722 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAA TTTTTAAAGT CTCCCTGGCC GCCCTTTCGC TGGCCTTTGC CGTAAGCTCC 
CACGCAGCAG ACAAACTGGT CGTCGCCACC GACACCGCAT TCGTTCCTTT TGAGTTCAAG
CAAGGCGACA AATATGTCGG CTTCGATATC GACCTGTGGG CCGCTATCGC CAAAGAACTG
AAACTGGATT ACACCCTGAA ACCAATGGAT TTCAGCGGCA TCATCCCGGC ACTGCAAACC
AAAAACATCG ATCTGGCGCT GGCCGGTATC ACCATTACTG AAGAACGTAA AAAAGCCATC
GAATTCTCCG ACGGCTACTA CAAAAGCGGC CTGCTGGTGA TGGTTAATGC CAACGACAAC
AACATCAAGG GCATTGACGA TCTGAACGGT AAAGTGGTGG CGGTGAAGAG CGGCACCGGT
TCCGTTGATT ACGCCAAACA ACACATCAAA ACCAAAGACC TGCGTCAGTT CCCGAACATC
GATAACGCCT ATATGGAACT GGGCACCAAG CGTGCCGATG CGGTGCTGCA CGACACGCCA
AACATCCTGT ACTTCATCAA AACTGCCGGC GCCGGCAAGT TCAAAACCGT GGGTGAATCA
CTGGAAGCTC AGCAATACGG CATCGCCTTC CCGAAAGGCA GTGACGAGCT GCGCGTGAAG
GTCAATGGCG CGCTGAAAAC GCTGCGCGAC AACGGCACCT ACAACGAAAT CTACAAAAAA
TGGTTCGGTA CCGAACCTAA ATAA
 
Protein sequence
MKSIFKVSLA ALSLAFAVSS HAADKLVVAT DTAFVPFEFK QGDKYVGFDI DLWAAIAKEL 
KLDYTLKPMD FSGIIPALQT KNIDLALAGI TITEERKKAI EFSDGYYKSG LLVMVNANDN
NIKGIDDLNG KVVAVKSGTG SVDYAKQHIK TKDLRQFPNI DNAYMELGTK RADAVLHDTP
NILYFIKTAG AGKFKTVGES LEAQQYGIAF PKGSDELRVK VNGALKTLRD NGTYNEIYKK
WFGTEPK