Gene Spro_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1478 
SymbolglnP 
ID5607362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1614118 
End bp1614777 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content57% 
IMG OID640937010 
Productglutamine ABC transporter permease protein 
Protein accessionYP_001477710 
Protein GI157369721 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCG ACTGGAGCGC CATCTGGCCC GCCATCCCCA TCCTGTTAGA AGGCGCCAAA 
ATGACCCTGT GGATTTCGGT CCTCGGTCTG ATTGGCGGCC TGATCATCGG CCTGGTTGCC
GGCTTTGCCC GTACCTACGG CGGTTGGATT GCCAACCACG TGGCTCTGGT ATTCATCGAA
GTTATTCGCG GTACGCCAAT CGTGGTGCAG GTGATGTTTA TCTACTTCGC CCTGCCGATG
GCGTTCAGCG ATTTACGCAT CGATCCTTTC AGCGCGGCGG TGGTCACCAT CATGATCAAC
TCCGGGGCCT ATATTGCGGA AATTACCCGT GGTGCCGTGC TGTCGATTCA TAGCGGCTTC
CGTGAGGCCG GCCTGGCATT AGGCCTGTCA CGCCGTGAAA CCATCCGTTA TGTCATTATG
CCGCTGGCGC TGCGCCGCAT GCTGCCACCG CTGGGTAACC AGTGGATCAT CAGCATTAAG
GACACCTCGC TGTTTATCGT GATCGGCGTG GCGGAACTGA CCCGTCAGGG GCAGGAGATT
ATTGCCGGTA ACTTCCGCGC GCTGGAAATC TGGAGCGCCG TGGCGGTTAT TTATCTGATT
ATTACCCTGG TGCTGAGCTT CGTGCTGCGT CGTCTGGAAA GAAGGATGAA AATCCTGTGA
 
Protein sequence
MQFDWSAIWP AIPILLEGAK MTLWISVLGL IGGLIIGLVA GFARTYGGWI ANHVALVFIE 
VIRGTPIVVQ VMFIYFALPM AFSDLRIDPF SAAVVTIMIN SGAYIAEITR GAVLSIHSGF
REAGLALGLS RRETIRYVIM PLALRRMLPP LGNQWIISIK DTSLFIVIGV AELTRQGQEI
IAGNFRALEI WSAVAVIYLI ITLVLSFVLR RLERRMKIL