Gene Spro_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1425 
Symbol 
ID5606683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1557416 
End bp1558114 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID640936957 
ProductABC transporter-related protein 
Protein accessionYP_001477657 
Protein GI157369668 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAG TGAATGAACT GAATCAATAT TACGGTGGCA GCCACATTTT GCGCGGCCTG 
TCGTTTGAAG CTCATATCGG CGAAGTGACC TGCCTGTTGG GGCGCAACGG CGTGGGGAAA
ACCACGTTGC TGAAATGCCT GATGGGGCTG ATCCCGGCCA GGAGCGGCGG CATCAGTTGG
CAGGGTGAAA GCCTTAACGG CAGAAAACCA CACCAACGGG TGCAGGCTGG GGTGGCCTAT
GTGCCGCAGG GGCGTGAGAT CTTTGGTCGC CTGACGGTGG AAGAAAATCT GCTGATGGGG
CTGGCACGTT TTTCAGGCAG CCAGGCGCGC AAGGTACCGG ATCATATCTA TGAACTGTTC
CCGGTGCTGT TGCAGATGAA AGATCGGCGC GGCGGCGATC TCTCCGGTGG GCAACAACAG
CAGTTGGCGA TTGGGCGTGC GCTGGCCTGC CGACCGCAGC TGTTGATCCT TGATGAGCCG
ACGGAGGGGA TCCAACCTTC GGTGATCAAA GAGATCGGTG CAGTGATCAA ACAGTTGGCG
GCCCAGGGGG ATATGGCGAT CCTGCTGGTG GAACAGTTTT ATGATTTTGC CGCCGAGCTG
GCGGACCGCT ATCTGGTGAT GTCGCGCGGC AGTATCGTCC AGCGCGGTGC AGGCAGCGCG
ATGGAGCAAG ACGGCGTGCG CGGGCTGGTG GCGATATAA
 
Protein sequence
MLQVNELNQY YGGSHILRGL SFEAHIGEVT CLLGRNGVGK TTLLKCLMGL IPARSGGISW 
QGESLNGRKP HQRVQAGVAY VPQGREIFGR LTVEENLLMG LARFSGSQAR KVPDHIYELF
PVLLQMKDRR GGDLSGGQQQ QLAIGRALAC RPQLLILDEP TEGIQPSVIK EIGAVIKQLA
AQGDMAILLV EQFYDFAAEL ADRYLVMSRG SIVQRGAGSA MEQDGVRGLV AI