Gene Spro_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1424 
Symbol 
ID5606676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1556601 
End bp1557407 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content59% 
IMG OID640936956 
ProductABC transporter-related protein 
Protein accessionYP_001477656 
Protein GI157369667 
COG category[R] General function prediction only 
COG ID[COG4674] Uncharacterized ABC-type transport system, ATPase component 
TIGRFAM ID[TIGR03411] urea ABC transporter, ATP-binding protein UrtD 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGC TGCAAATGAC CGACGAACTG TTCACCCAGC CGCTACCGGC CGATAAATAT 
CGCCAGCAAA CCGATCCGGT GCTGCTGCTC GACAAGATCA ACGTCAGTTT TGACGGTTTT
CGTGCACTGA GCGATCTGTC GTTGCAGATC GGTGTGGGTG AACTGCGCTG CGTGATCGGG
CCAAACGGCG CGGGGAAAAC CACGCTGATG GATGTGATCA CCGGCAAAAC CCGGCCGGAC
AGCGGCAGGG TGTTTTACGA TCAAACCGTC GATCTGACCG CGCTGGATCC GATGCAGATC
GCCCAGGCCG GCATCGGTCG CAAGTTCCAA AAGCCCACGG TGTTTGAGGC GCTGACGGTG
TTCGAAAATC TGGAGATCGC CCAGAAAACT CAGAAGTCGG TATGGGCCTG CCTGCGCGCC
AAACTGAGCA GCGAACAACG CGACCGTATC GATGAAATGC TGAAAACCCT GCGGCTGGGC
CATGAACGCT ATCGTCCCGC CGGGCTGCTG TCCCACGGGC AAAAACAGTT TCTCGAAATT
GGCATGCTAT TGGTGCAGGA ACCGCACCTG CTGCTGCTCG ATGAACCGGC GGCCGGTATG
ACCGACGCGG AAACCGAGTA CACCGCCGAA CTGTTCCGCT CGCTGGCGGG CAAGCATTCG
CTGATGGTGG TGGAGCACGA CATGGGGTTT GTCGAAACCA TTGCCGACCA CGTCACGGTG
CTGCATCAGG GCCAGGTGTT GGCGGAAGGC TCATTGGCGC AGGTACAGGC CGACGAGCAG
GTGATCGAAG TGTATTTAGG GCGCTAG
 
Protein sequence
MNSLQMTDEL FTQPLPADKY RQQTDPVLLL DKINVSFDGF RALSDLSLQI GVGELRCVIG 
PNGAGKTTLM DVITGKTRPD SGRVFYDQTV DLTALDPMQI AQAGIGRKFQ KPTVFEALTV
FENLEIAQKT QKSVWACLRA KLSSEQRDRI DEMLKTLRLG HERYRPAGLL SHGQKQFLEI
GMLLVQEPHL LLLDEPAAGM TDAETEYTAE LFRSLAGKHS LMVVEHDMGF VETIADHVTV
LHQGQVLAEG SLAQVQADEQ VIEVYLGR