| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1390 |
|---|
| Symbol | |
|---|
| ID | 5606232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1518193 |
|---|
| End bp | 1518864 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640936922 |
|---|
| Product | curli production assembly/transport component CsgG |
|---|
| Protein accession | YP_001477622 |
|---|
| Protein GI | 157369633 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CACTCGTTGT CTGCTCAGTC GCCCTTTCTG TCAGCATGCT GGCAGGCTGT
GCTACTGAAT CCTCGCGCTC TCTGGAAGTG CCTAAAGTGG CGTCCTACAA CACCAATTAC
CAAGGCCAAC GCAGCCCTAT CTCCGTCGGC AAGTTCGATA ACCGCTCCAG CTATATGAAC
GGCATCTTCT CCGATGGCGT GGATCGCCTG GGTAACCAGT CCAAAACCAT CCTGATCACC
CATCTGCAGC AAACCGGCCG CTTCAACGTG CTGGATCGCG CCAATATGGA TGAGTTGAAA
ACCGAAGCCG GCATTAAAGG CAAAACCCAG ACGCTGAAAG GTGCCAACTA CGTGATCACC
GGTGATGTTA CCGAGTTCGG TCGTAAAGAA GTGGGTGATC ACCAGCTGTG GGGCATTCTG
GGACGCGGTA AAACGCAGGT GGCCTATGCC AAGGTCAATT TGAATGTGGT CAACGTACAG
ACCTCAGAAG TGGTTTACTC CACCCAAGGT GCCGGCGAGT ACCAACTCTC CAACCGTGAA
ATCATCGGCT TCGGCGGCAC CGCCAGCTAC GATTCCACCC TCAACGGCAA AGTGTTGGAT
CTGGCCGTAC GCGAAGCGGT CAATAACCTG GTTGCCGGTA TCGAAAGTGG CGCATGGCGC
CCTGCTAACT AA
|
|---|
| Protein sequence | MKKSLVVCSV ALSVSMLAGC ATESSRSLEV PKVASYNTNY QGQRSPISVG KFDNRSSYMN
GIFSDGVDRL GNQSKTILIT HLQQTGRFNV LDRANMDELK TEAGIKGKTQ TLKGANYVIT
GDVTEFGRKE VGDHQLWGIL GRGKTQVAYA KVNLNVVNVQ TSEVVYSTQG AGEYQLSNRE
IIGFGGTASY DSTLNGKVLD LAVREAVNNL VAGIESGAWR PAN
|
|---|
| |