Gene Spro_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1381 
Symbol 
ID5606185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1509459 
End bp1510643 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID640936913 
Productmajor facilitator transporter 
Protein accessionYP_001477613 
Protein GI157369624 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATA ATAATGATAA ACCTGCACCA TCAGCCTGGC TGGCGATTTT CTCACTGACG 
GTCGCCTGCT TTGTGATGGT CACCACCGAG TTTCTGCCGA TCGGCCTGCT AACCAACATC
GCGCCGTCGC TGGATGTCAG CACCGGCAGA GCCGGCCTGA TGGTGACCGT GCCCGGCATT
ATCGCGGCGA TCGCCGCACC GGCACTGAGC CTGGCAGCCG GTCGGCTCGA TCGTCGCCTG
CTGATGCTGG CGCTGAGCGT ACTGCTGGCC ATCTCCAATC TGGTTTCCGC ACTGGCGGTT
AACTTCCCCA TGATGCTGCT GGGCCGCGTG TTACTGGGTA TCTGCGTCGG CGGCTTTTGG
GCTTTCGCCG CCAACTATGG CCGCCATTTG GTGCCGGAAG CCAGCCAGGG ACGCGCCACC
GCGCTGATCC TCAGCGGTAT TTCGGTGGGT GCCGTATGCG GCGTCCCTGC CGGGGCCTTG
ATTGGTGACC TGTTCGGCTG GCGTGCCGCC TTCTTTGGCA GCGCGGTGCT GGCAGTCGGG
GTATTGCTGG CGCAACTGCG CCTTTTGACC TCGGTCCCCC CTACTCGCCC AGTCACCGCA
CGCGATCTGC TGTTACCGCT GCGCCTGCCG ATGGCACGTA CCGGGCTGAT TGCCATCGTG
CTGTTGTTTA TCGGCCATTT TGCCGCCTAT ACCTACCTGA AACCGCTGCT GCAACAGGTG
TTTGTCCTCA GCCCGTCGGC GATATCACTG CAACTGCTGG CCTACGGTGC CATTGGCCTG
CTGGGCACCT TCCTGGGTGA ACGACTGGCC GAACGCAGCC TGCGTGCCAC CTTTATCCTG
ATCACCGCCA TGTTGGCCGC TATCCTGATT GTCTCGCCGT TCCTTAGCGG TATCGCCGGT
GCCACGCTGA TGGTGATGGT GTGGGGGTTG GCGTTTGGCG CCGTGCCGGT CTGCGCCACC
AACTGGATGT TCGCCGCCGT GCCACAGGCA CCGGAAGCCG GTCAGGCACT GCTGGTCTGC
GTGATCCAGA TTGCGCTGGC CTCCGGTGCG CTACTGGGTG GTGAAGTGGT CGACTGGCAG
GGCGTCAGCA GCGCCATGCT GTTTGGCGGC GCACTCACGC TGTCCGCCGC GCTGGTTTTC
GGCCTGACCT TGCGTTCCGG CATGATTGGC GTTAAACAGT CATAA
 
Protein sequence
MLNNNDKPAP SAWLAIFSLT VACFVMVTTE FLPIGLLTNI APSLDVSTGR AGLMVTVPGI 
IAAIAAPALS LAAGRLDRRL LMLALSVLLA ISNLVSALAV NFPMMLLGRV LLGICVGGFW
AFAANYGRHL VPEASQGRAT ALILSGISVG AVCGVPAGAL IGDLFGWRAA FFGSAVLAVG
VLLAQLRLLT SVPPTRPVTA RDLLLPLRLP MARTGLIAIV LLFIGHFAAY TYLKPLLQQV
FVLSPSAISL QLLAYGAIGL LGTFLGERLA ERSLRATFIL ITAMLAAILI VSPFLSGIAG
ATLMVMVWGL AFGAVPVCAT NWMFAAVPQA PEAGQALLVC VIQIALASGA LLGGEVVDWQ
GVSSAMLFGG ALTLSAALVF GLTLRSGMIG VKQS