Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1371 |
Symbol | |
ID | 5606048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1500348 |
End bp | 1502645 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640936903 |
Product | glycoside hydrolase family 3 protein |
Protein accession | YP_001477603 |
Protein GI | 157369614 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGC TTTGTGTGGT GAGTATGTTG TCCGGTCTGG CCATCAGCCC GGTTTTTGCG CAGGAAAGCG CCGTGATCCA GGGCGTTAAT GCCCAGCAGC GCGACGCCTT TGTCAGCAAC CTGATGAAAC AGATGACGCT GGAAGAAAAA ATCGGCCAGC TGCGGTTAAT CAGCGTCGGA CCGGATAATC CGAAAGAGGC GATCCGCGAC GGCATCAGCA AGGGGCAGAT TGGCGCCATC TTCAATACCG TCACCCGGCC GGATATTCGC GCCATGCAGG ATCAGGCGAT GCAGCTCAGC CGCCTGAAAA TTCCGTTGTT CTTTGCCTAC GACGTGGTGC ACGGCCAACG CACCGTGTTC CCGATCAGCC TTGGGCTGGC GGCCAGTTTT GATCTCGAAG CCATCGCCCT CAGTGGCCGG GTATCGGCGC AGGAGGCCAG CGACGACGGC CTGAACATGA CCTTCTCGCC GATGGTCGAC ATCACCCGCG ACCCGCGCTG GGGCCGGGTC TCGGAAGGCT TCGGCGAAGA TACCTGGCTG GTATCCAAAA TTGCCAAAGT GATGGTGGAT GCCTATCAAA ACGGCGACCC GTCCAAGCCC GGCTCAATCA TGGCCAGCGT GAAGCACTTC GCGCTGTACG GTGCCACCGA GGGTGGCCGC GATTACAATA CCGTCGATAT GAGTCCACTG AGAATGTACC AGGACTACCT GCCGCCTTAT AAGGCCGCGG TTGACGCCGG CAGCGGTGGG GTGATGGTCT CGCTCAATTC GATAAACGGC ATTCCGGCTA CCGCTAACCC CTGGTTGCTG AAAGATTTGC TGCGCGACCA GTGGGGCTTC AAGGGCATCA CCATCAGTGA CCACGGTGCG ATTAAAGAGT TGATCAAACA CGGCGTGGCC GCAGATGCGC GCGATGCGGT GCGCCTGGCG ATTACCTCCG GCGTCGATAT GAGCATGAGC GACGAATATT ACGACCAATA CCTACCGGGG CTGGTGAAGG ACGGGCTGGT ATCGGAAAGT GACATCGACC GTGCCTGTCG CGACGTGCTG AATACCAAAT ATGATATGGG CCTGTTTAAA GACCCTTACA CCCACTTGGG GCCGGTCGGT TCCGATCCGC AGGACACTAA CGCCGAAAGC CGTTTGCATC GTGCCGAAGC GCGCGTAGTT GCGCGTAAAA CCATGGTGCT GTTGAAGAAT GATAAGCAGA CGCTGCCACT CAGCAAGCAG GCGACCATTG CGCTGGTCGG GCCGATGGCC GACAGCCAGC GTGATGTGAT GGGCAGTTGG TCGGCGGCCG GGGTGATTAA ACAGTCGGTC ACCCTGCGTG AGGGTCTGGA ACGTGCGGTG GGCGACAAGG CTAAAATCCT CTACGCCAAG GGCGCCAACG TCACTCAGGA CAAGGGCATT ATCAACTATC TGAATGAATA TGAGCCGGCG GTGGCGTTTG ATACTCGTCC ACCGCAGCAG ATGATTGACG AAGCGGTGCA GGCGGCGAAG AAAGCCGATG TCGTGGTGGC AGTGGTGGGG GAATCGCAGG GCATGGCTCA CGAGGCTTCC AGCCGCGCCG ACATTACCAT TCCACAAAGC CAACGTGACC TAATCGCCGC GCTGAAAGCA ACCGGCAAAC CGCTGGTGCT GGTGCTGATG AATGGCCGAC CGCTGGCGCT GAGCTGGGAA AGTCAGCAGG CGGATGCGAT GCTGGAAACC TGGTACAGCG GCACCGAGGG CGGCAATGCG GTGGCCGACG TACTGTTTGG CGACTACAAC CCGTCGGGCA AGCTGCCGAT GACCTTCCCG CGTTCTGTCG GGCAGATCCC GATGTACTAC AACCACCTGA ATACCGGCCG TCCGTTCGGC AAGGAAAACC CGGGTAAATA TACCTCCCGC TACTTCGACT CACCGAACGG CCCGCTGTAT CCGTTTGGTT ATGGCCTGAG CTACACCAGC TTTAGCCTGT CGGATCTGAA ACTCTCCAGC CCGACGATGG CGCGCAACGG CAAGATCACC GCCAGCGTCA CGCTCAAGAA CACCGGTAAA TATGATGGTG CCACCGTGGT GCAGTTGTAT CTGCAGGACG TGACCGCCTC GGTCAGTCGC CCGGTAAAAG AGCTGCGTAA CTTTAAAAAG GTGATGCTGA AAGCGGGGCA GGCGCAGAAG GTGGAGTTGC CTATTACCGA AGAGGATCTC AAGTTCTATA ACGCCAGCCT GAAATGGGGC GCGGAACCGG GCAAGTTTAA TGTGTTTGTC GGCCTGGATT CCGACGACGT ACAGGCGCAG AGCTTTACGC TGAAGTAA
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Protein sequence | MKWLCVVSML SGLAISPVFA QESAVIQGVN AQQRDAFVSN LMKQMTLEEK IGQLRLISVG PDNPKEAIRD GISKGQIGAI FNTVTRPDIR AMQDQAMQLS RLKIPLFFAY DVVHGQRTVF PISLGLAASF DLEAIALSGR VSAQEASDDG LNMTFSPMVD ITRDPRWGRV SEGFGEDTWL VSKIAKVMVD AYQNGDPSKP GSIMASVKHF ALYGATEGGR DYNTVDMSPL RMYQDYLPPY KAAVDAGSGG VMVSLNSING IPATANPWLL KDLLRDQWGF KGITISDHGA IKELIKHGVA ADARDAVRLA ITSGVDMSMS DEYYDQYLPG LVKDGLVSES DIDRACRDVL NTKYDMGLFK DPYTHLGPVG SDPQDTNAES RLHRAEARVV ARKTMVLLKN DKQTLPLSKQ ATIALVGPMA DSQRDVMGSW SAAGVIKQSV TLREGLERAV GDKAKILYAK GANVTQDKGI INYLNEYEPA VAFDTRPPQQ MIDEAVQAAK KADVVVAVVG ESQGMAHEAS SRADITIPQS QRDLIAALKA TGKPLVLVLM NGRPLALSWE SQQADAMLET WYSGTEGGNA VADVLFGDYN PSGKLPMTFP RSVGQIPMYY NHLNTGRPFG KENPGKYTSR YFDSPNGPLY PFGYGLSYTS FSLSDLKLSS PTMARNGKIT ASVTLKNTGK YDGATVVQLY LQDVTASVSR PVKELRNFKK VMLKAGQAQK VELPITEEDL KFYNASLKWG AEPGKFNVFV GLDSDDVQAQ SFTLK
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