Gene Spro_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1367 
Symbol 
ID5605981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1495833 
End bp1496936 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content57% 
IMG OID640936899 
ProductD-alanine--D-alanine ligase 
Protein accessionYP_001477599 
Protein GI157369610 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAAT TACGTGTTGG GGTGATCTTT GGCGGTAAAT CGGCGGAGCA TGAAGTTTCG 
CTGCAGTCGG CAAAAAACAT TGTGGATGCA ATCGACAAAG AGAAGTTTGA CGTCACGCTG
CTGGGGATCG ACAAGCAGGG GCAATGGCAC ATTAACGATG CGTCCAATTA CCTGCTGAAT
GCGGAAAACC CGGCGCTGAT CGCGCTGAAC CGCTCAAATA AAAATGTGGC GCTGATCCCC
GGTCAGGAGA AACAGCAGCT GATCGAGTCG GGCAGCCAGG GCGCACTGGG CCAGTTGGAT
GTGATATTCC CGATCGTACA CGGCACATTG GGTGAGGACG GTTCGCTGCA GGGGCTGTTG
CGAATGGCTA ATCTGCCGTT CGTCGGTGCC GGCGTGTTGG GTTCGGCGGT CAGCATGGAT
AAAGACGTGA CCAAACGCCT GCTGCGTGAT GCCGGGCTGG CGATAGCGCC GTTTGTGACG
CTGACCCGCA GCAATCGCGC CAAATTCGAT TTTGAGCAGC TTAGCGAACG TCTGGGGCTG
CCGCTGTTTG TTAAACCGGC CAACCAGGGC TCTTCGGTAG GCGTCAGCAA GGTACAGGAT
CGCGCCGGTT TTGAGGCTGC GGTGGCGCTG GCGTTCAGCT TCGATCATAA GGTGCTGGTG
GAGTCGGCGA TTGTCGGTCG TGAAATAGAA TGCGCGGTAT TGGGCAACGA CGAACCTCAG
GCCAGCCTGT GCGGCGAAAT CGTGTTGAGC GACGCCTTTT ATTCCTACGA CACCAAATAC
ATCAATGAGC AGGGTGCTCA GGTGATAGTG CCGGCGGCGA TTGAGCCGGA GGTGAGCGAT
AAAATCCGCG ACGTGGCGCT AAAAGCCTTT CGGGCGCTGG AGTGTTTCGG GCTGGCGCGC
GTCGATGTAT TTCTGACGCC GGACAACAAC GTGGTGATCA ACGAAATCAA CACGCTGCCA
GGCTTTACCA ATATCAGCAT GTATCCCAAA CTGTGGGCCG CCAGCGGTGT CAGCTACAGC
CAATTGATCA CTCGCCTGAT TGAGCTGGCG ATGGAACGCC ATCAGCAGGA TCGCGCTTTG
AACAGCTCGG TGTTTGACCG GTAA
 
Protein sequence
MSKLRVGVIF GGKSAEHEVS LQSAKNIVDA IDKEKFDVTL LGIDKQGQWH INDASNYLLN 
AENPALIALN RSNKNVALIP GQEKQQLIES GSQGALGQLD VIFPIVHGTL GEDGSLQGLL
RMANLPFVGA GVLGSAVSMD KDVTKRLLRD AGLAIAPFVT LTRSNRAKFD FEQLSERLGL
PLFVKPANQG SSVGVSKVQD RAGFEAAVAL AFSFDHKVLV ESAIVGREIE CAVLGNDEPQ
ASLCGEIVLS DAFYSYDTKY INEQGAQVIV PAAIEPEVSD KIRDVALKAF RALECFGLAR
VDVFLTPDNN VVINEINTLP GFTNISMYPK LWAASGVSYS QLITRLIELA MERHQQDRAL
NSSVFDR