Gene Spro_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1359 
Symbol 
ID5605937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1489026 
End bp1489838 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content55% 
IMG OID640936891 
ProductYaeC family lipoprotein 
Protein accessionYP_001477591 
Protein GI157369602 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA ACTGGCGTTA TACCCCACTG CTGGCGGCCT TCGCCGCCGT ACTGGCGCTA 
CAAGGCTGCG ACCAAAAAAC CGATCAGAAT CATATCAAGG TCGGGGTCAT CAATGGTGCA
GAGCAAGACG TGGCGGAGGT GGCCAAACAG GTGGCCAAAG AGAAGTACGG TCTGGAGGTT
GAACTGGTCG GTTTCAGCGG TTCGCTGCTG CCCAACGACG CCACCGACAA AGGCGAACTG
GACGCCAACG TCTTCCAGCA CCGGCCGTTC CTCGAACAGC AGAATAAAGA TCACGGCTAC
AAGCTGGTGG CCGTGGGCAA TACCTTCGTA TTCCCGATGG CCGGCTATTC GAAAAAAATC
AAATCACTGA AAGAACTGCA GGACGGTGCG GTGATTGCCA TCCCGCTGGA TCCCACCAAC
CTCGGCCGCG CACTGCTGCT GCTGGAGAAA ACCGGTCTGA TCACGTTGAA ACCGGGCAAA
GGGCTGCTGC CAACCTCGCT GGATATCAGC GCCAACCCGC ATAACTACAA GATTATGGAA
CTGGAGGGCG CACAGCTGCC GCAGGTGCTC GATGACCCTA AAGTCACCAT CGCCGTCATC
AGCACCACTT ACATCAACCA GACCGGTCTG ACGCCAACCA AAGACGGCAT CTTTATCGAA
GACAAGAATT CGCCGTACAC CAACATCATC GTGACGCGTG AAGACAACAA GGATGCGCCG
AACGTGCAAA ACTTCATCAA GGCCTACGAG TCGGATGAAG TGGCCAAGGC CGCCGAGAAA
ATCTTTAATG GCGGTGCGGT AAAAGGCTGG TAA
 
Protein sequence
MSKNWRYTPL LAAFAAVLAL QGCDQKTDQN HIKVGVINGA EQDVAEVAKQ VAKEKYGLEV 
ELVGFSGSLL PNDATDKGEL DANVFQHRPF LEQQNKDHGY KLVAVGNTFV FPMAGYSKKI
KSLKELQDGA VIAIPLDPTN LGRALLLLEK TGLITLKPGK GLLPTSLDIS ANPHNYKIME
LEGAQLPQVL DDPKVTIAVI STTYINQTGL TPTKDGIFIE DKNSPYTNII VTREDNKDAP
NVQNFIKAYE SDEVAKAAEK IFNGGAVKGW