Gene Spro_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1329 
Symbol 
ID5605597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1458998 
End bp1459984 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content60% 
IMG OID640936861 
Producthypothetical protein 
Protein accessionYP_001477561 
Protein GI157369572 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA AACGCAGTGC CTTTTTGGTG GCGGTTGTTG TGCTGATCGC CGCGGCCGTT 
TACGGGGTCT GGTATTACCA ACAGCATCAG GATAAACCGC TGACGCTGTA CGGTAACGTG
GATATTCGCA CGGTGAATTT GGGCTTCCGC GTCGATGGCC GTCTGGCGTC GCTGACGGTG
GATGAAGGCG ATACCCTGCA ACCGGGGCAA TTACTCGGCA AACTGGACGA CGCGCCCTAC
ATCAACGCGC TACAGCAGGC GCAGGCTAAC GTCGGCAGTG CTAAAGCCAA GTTGGCGCTG
CTGATGGCCG GTTACCGCGC CGAAGAAATT GCCCAGGTAC GTTCGGAAAT GGCGCAGCGC
CTGTCCGCCT TTAGCTATGC CGATAGCTTC CTGAAGCGTC AGCAGGGCCT GTGGGCGAAA
AATGCCACCT CAGCCGACGC GCTGGAAGAT GCCCGCACCT CACGCAATCA GGCGCAGGCC
AACCTGCAGG CGTCGAAGGA CAAGCTGGCG CAATACCTGA GCGGTAATCG TCCGCAAGAA
ATAGAAGAGG CCAAAGCCAA TCTGGCGCAA AGCGAGGCCG CACTGGCTCA GGCCCAGCTT
AACCTGCACG ACACCACTTT GGTTTCCCCG TCCGCCGGCA CGGTGCTGAC GCGGGCGGTC
GAGCCGGGCA CCATGCTCAG CGCCGGTGGC ACGGTGTTCA CTTTGTCGCT GACCCGTCCG
GTGTGGGTGC GTGCCTATGT GAATGAAACC AGTCTGAGTA AAGCGACACC CGGTACCGAA
CTGGAAATCT ATACCGATGG CCGGCCAGAC AAGCCGTATC ACGGCAAAAT CGGCTTTGTC
TCGCCGACCG CTGAATTCAC GCCGAAGAGC GTCGAAACCC CGGACCTGCG TACCGACCTG
GTGTACCGCC TGCGGGTGAT AGTGACCGAT GCCGATGACG CGCTGCGCCA GGGGATGCCG
GTCACCGTTC GCTTTGCCCA ACCTTGA
 
Protein sequence
MNKKRSAFLV AVVVLIAAAV YGVWYYQQHQ DKPLTLYGNV DIRTVNLGFR VDGRLASLTV 
DEGDTLQPGQ LLGKLDDAPY INALQQAQAN VGSAKAKLAL LMAGYRAEEI AQVRSEMAQR
LSAFSYADSF LKRQQGLWAK NATSADALED ARTSRNQAQA NLQASKDKLA QYLSGNRPQE
IEEAKANLAQ SEAALAQAQL NLHDTTLVSP SAGTVLTRAV EPGTMLSAGG TVFTLSLTRP
VWVRAYVNET SLSKATPGTE LEIYTDGRPD KPYHGKIGFV SPTAEFTPKS VETPDLRTDL
VYRLRVIVTD ADDALRQGMP VTVRFAQP