Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1329 |
Symbol | |
ID | 5605597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1458998 |
End bp | 1459984 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640936861 |
Product | hypothetical protein |
Protein accession | YP_001477561 |
Protein GI | 157369572 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAAA AACGCAGTGC CTTTTTGGTG GCGGTTGTTG TGCTGATCGC CGCGGCCGTT TACGGGGTCT GGTATTACCA ACAGCATCAG GATAAACCGC TGACGCTGTA CGGTAACGTG GATATTCGCA CGGTGAATTT GGGCTTCCGC GTCGATGGCC GTCTGGCGTC GCTGACGGTG GATGAAGGCG ATACCCTGCA ACCGGGGCAA TTACTCGGCA AACTGGACGA CGCGCCCTAC ATCAACGCGC TACAGCAGGC GCAGGCTAAC GTCGGCAGTG CTAAAGCCAA GTTGGCGCTG CTGATGGCCG GTTACCGCGC CGAAGAAATT GCCCAGGTAC GTTCGGAAAT GGCGCAGCGC CTGTCCGCCT TTAGCTATGC CGATAGCTTC CTGAAGCGTC AGCAGGGCCT GTGGGCGAAA AATGCCACCT CAGCCGACGC GCTGGAAGAT GCCCGCACCT CACGCAATCA GGCGCAGGCC AACCTGCAGG CGTCGAAGGA CAAGCTGGCG CAATACCTGA GCGGTAATCG TCCGCAAGAA ATAGAAGAGG CCAAAGCCAA TCTGGCGCAA AGCGAGGCCG CACTGGCTCA GGCCCAGCTT AACCTGCACG ACACCACTTT GGTTTCCCCG TCCGCCGGCA CGGTGCTGAC GCGGGCGGTC GAGCCGGGCA CCATGCTCAG CGCCGGTGGC ACGGTGTTCA CTTTGTCGCT GACCCGTCCG GTGTGGGTGC GTGCCTATGT GAATGAAACC AGTCTGAGTA AAGCGACACC CGGTACCGAA CTGGAAATCT ATACCGATGG CCGGCCAGAC AAGCCGTATC ACGGCAAAAT CGGCTTTGTC TCGCCGACCG CTGAATTCAC GCCGAAGAGC GTCGAAACCC CGGACCTGCG TACCGACCTG GTGTACCGCC TGCGGGTGAT AGTGACCGAT GCCGATGACG CGCTGCGCCA GGGGATGCCG GTCACCGTTC GCTTTGCCCA ACCTTGA
|
Protein sequence | MNKKRSAFLV AVVVLIAAAV YGVWYYQQHQ DKPLTLYGNV DIRTVNLGFR VDGRLASLTV DEGDTLQPGQ LLGKLDDAPY INALQQAQAN VGSAKAKLAL LMAGYRAEEI AQVRSEMAQR LSAFSYADSF LKRQQGLWAK NATSADALED ARTSRNQAQA NLQASKDKLA QYLSGNRPQE IEEAKANLAQ SEAALAQAQL NLHDTTLVSP SAGTVLTRAV EPGTMLSAGG TVFTLSLTRP VWVRAYVNET SLSKATPGTE LEIYTDGRPD KPYHGKIGFV SPTAEFTPKS VETPDLRTDL VYRLRVIVTD ADDALRQGMP VTVRFAQP
|
| |