Gene Spro_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1275 
Symbol 
ID5604757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1402722 
End bp1403126 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content50% 
IMG OID640936802 
Productacyl-CoA thioester hydrolase YbgC 
Protein accessionYP_001477507 
Protein GI157369518 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000950764 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000140311 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTAATA CGTTGTTTCG ATGGCCGGTT CGCGTTTACT ACGAAGATAC CGATGCCAGT 
GGTGTGGTCT ATCACGCCCG CTATGTGGCT TTTTTTGAAA GAGCGCGCAC CGAGATGCTG
CGTCATCATA ACTTTCATCA ACAGCAGCTG CTCAGTGAAA ATGTCGCCTT CGCTGTCCGG
CGCATGACGG TTGATTATCT GCTTCCTGCT CGTCTTGACG ACCAGCTGGA AGTCCAGAGT
GAAATCACCT CAATGCGCGG GGCTTCTCTT ACGTTTGCTC AACGCATTGT CAATTCTGAC
GGAACTCTTT TGAGTCAGGC CGACGTGTTG ATTGCATGTA TTGATCCACA CCAAATGAAG
CCGATAGCGC TTCCTAAGTC TATTGTCGCG GAGTTTAAGC AGTGA
 
Protein sequence
MSNTLFRWPV RVYYEDTDAS GVVYHARYVA FFERARTEML RHHNFHQQQL LSENVAFAVR 
RMTVDYLLPA RLDDQLEVQS EITSMRGASL TFAQRIVNSD GTLLSQADVL IACIDPHQMK
PIALPKSIVA EFKQ