| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1265 |
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| Symbol | sdhA |
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| ID | 5604581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1389689 |
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| End bp | 1391455 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640936792 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001477497 |
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| Protein GI | 157369508 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.648217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.132874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC CGGTCAGAGA GTTTGATGCT GTAGTTATCG GTGCAGGCGG TGCAGGTATG
CGCGCGGCAC TGCAAATTTC TCAAGCGGGT TCTTCTTGTG CCCTGCTGTC CAAAGTATTC
CCGACCCGTT CCCATACCGT GTCTGCACAG GGCGGCATTA CCGTAGCCCT GGGTAATAAC
CACGAAGATA ACTGGGAATG GCATATGTAT GACACGGTGA AAGGTTCCGA TTATATCGGT
GACCAGGACG CCATTGAGTA TATGTGTAAA ACCGGCCCGG AAGCAGTTCT GGAGCTGGAG
CATATGGGGC TGCCGTTCTC CCGTACCGAC GATGGCCGCA TCTATCAGCG CCCATTCGGC
GGCCAGTCAC TGAATTTCGG TGGCGAGCAG GCTGCACGTA CCGCTGCGGC GGCTGACCGT
ACCGGTCACG CCCTGCTGCA CACCCTGTAT CAACAGAACC TGAAAAATCA CACCACTATC
TTCTCCGAGT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCAGT GGTCGGCACC
ACGGCTATCT GTATTGAAAC CGGTGAAGTG GTTTACTTCA AAGCCAAAGC CACCGTGCTG
GCGACCGGCG GTGCAGGCCG TATTTACCAG TCCACCACCA ACGCCCATAT CAACACCGGT
GACGGTGTCG GCATGGCGCT GCGTGCCGGC GTGCCGGTGC AGGACATGGA AATGTGGCAG
TTCCACCCGA CCGGCATCGC CGGTGCCGGG GTTCTGGTGA CCGAAGGTTG TCGTGGTGAA
GGCGGTTATC TGCTGAACAA ACACGGTGAG CGTTTCATGG AGCGCTATGC GCCGAACGCC
AAAGACCTGG CGGGCCGTGA TGTGGTAGCC CGTTCGATCA TGATTGAAAT CCGCGAAGGC
CGTGGCTGTG ACGGTCCGTG GGGCCCGCAC GTTAAGCTGA AGCTGGATCA CCTGGGTAAA
GAAGTGCTGG AATCCCGCCT GCCGGGCATT CTGGAACTGT CGCGCACCTT CGCGCACGTC
GACCCAGTGA AAGAGCCTAT CCCGGTTATC CCAACCTGCC ACTATATGAT GGGCGGTATT
CCGACCAAAG TGACCGGCCA GGCGTTGACC GTGAATGAGA AAGGCGAAGA CGTAGTGATC
CCGGGGCTGT TCGCAGTGGG CGAAATTGCC TGCGTATCGG TGCACGGCGC CAACCGTCTG
GGCGGCAACT CGCTGCTGGA TCTGGTGGTG TTCGGTCGCG CCGCCGGCAT GCATCTGCAG
GAATCTATCC TCGAGCAGGG CGCCAGCCGT GAAGCGAGCG AATCCGATGT AGAAGCGTCG
CTGGATCGTC TGAACCGCTG GAACAACACC CGTTCAGGTG AAGATCCGGT TGAAATCCGC
AAGGCGCTGC AAGCCTGTAT GCAACACAAC TTCTCGGTAT TCCGTGAAGG TGATGCGATG
GCGAAAGGGC TGGAAGAACT GAAAGAGATC CGTGAACGTC TGAAGAACGC ACGTCTGGAC
GATACCTCCA GCGAATTCAA CACCCAGCGC ATCGAATGCC TGGAGTTGGA TAACCTGATG
GAGACCGCGT TTTCCACCGC CGTGTCGGCC AACTTCCGTA CCGAGAGCCG TGGCGCGCAT
AGCCGCTTCG ACTTCCCGGA ACGTGATGAT GCCAACTGGC TGTGTCACTC GCTGTATCAG
CCGCAATCGG AAAGCATGAC GCGTCGTGAA GTGAACATGC AACCGAAGCT GCGCCCGGCA
TTCCCGCCGA AAGTGCGTTC TTACTAA
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| Protein sequence | MKLPVREFDA VVIGAGGAGM RAALQISQAG SSCALLSKVF PTRSHTVSAQ GGITVALGNN
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAVLELE HMGLPFSRTD DGRIYQRPFG
GQSLNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGT
TAICIETGEV VYFKAKATVL ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPVQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG
RGCDGPWGPH VKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI
PTKVTGQALT VNEKGEDVVI PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGMHLQ
ESILEQGASR EASESDVEAS LDRLNRWNNT RSGEDPVEIR KALQACMQHN FSVFREGDAM
AKGLEELKEI RERLKNARLD DTSSEFNTQR IECLELDNLM ETAFSTAVSA NFRTESRGAH
SRFDFPERDD ANWLCHSLYQ PQSESMTRRE VNMQPKLRPA FPPKVRSY
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